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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | OIV96569 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
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| Family | bHLH | ||||||||
| Protein Properties | Length: 338aa MW: 37980.8 Da PI: 6.515 | ||||||||
| Description | bHLH family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | HLH | 37 | 6.1e-12 | 139 | 190 | 1 | 55 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
+r++h +Er+RR+++N+ + Lr+l+P + + ++ + a+i A++++k+L+
OIV96569 139 QRMTHITVERNRRKQMNEYLTMLRSLMPLS---YVQRGDQASIIGGAINFVKELE 190
79****************************...9******************995 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 338 aa Download sequence |
MALEAVVFPQ YPFSYGCNED YLYSLVGEGP ESTGGHAWIK DYGSQTSAEQ EKLLLGIINN 60 NIEQNLHATT WDSSSTSVLQ NAKEQWDYFH SSPEACTVDQ YLTEPNSSLE ATTVSTTTTG 120 RRKRRRTKNA KNKEEIENQR MTHITVERNR RKQMNEYLTM LRSLMPLSYV QRGDQASIIG 180 GAINFVKELE QHLQSMEGQK KIKQPHENFG LNGSLPFAEF FTFPQYTTCA NQSNNNTSGT 240 TMGQKQRGVA EIEVTMVDSH ANMKILSKKC SGQLMKMVVG LQSLRLGILH LNVTTVDDMV 300 LYSVSVKVEE GCQLNTVDEI AAAVNQLLRK IQEEAAFK |
| Nucleic Localization Signal ? help Back to Top | |||
|---|---|---|---|
| No. | Start | End | Sequence |
| 1 | 122 | 126 | RKRRR |
| 2 | 122 | 127 | RKRRRT |
| 3 | 122 | 129 | RKRRRTKN |
| 4 | 140 | 151 | RMTHITVERNRR |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT1G72210.1 | 5e-95 | bHLH family protein | ||||
| Link Out ? help Back to Top | |
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| Ensembl | OIV96569 |
| ©2010-2022, Center
for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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