PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIV96758
Organism
Lupinus angustifolius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
Family MIKC_MADS
Protein Properties Length: 171aa    MW: 19661.5 Da    PI: 9.6149
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIV96758genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF93.87.7e-30959151
              S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
    SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
              krien+snrqvt+skR+ngilKKA+E+ vLCda+v++iif+s+gk++ey+s
  OIV96758  9 KRIENSSNRQVTYSKRKNGILKKAKEITVLCDAQVSLIIFGSSGKMHEYIS 59
              79***********************************************86 PP
2K-box82.97.3e-2871151181
     K-box   1 yqkssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelq 81 
               y+k+sgk+l+++k+e+l++e++++kke++++q e+Rhl+Ged++sL++keL+ Le++L+++l+ +R+kK + l e+ +el 
  OIV96758  71 YHKASGKRLWDTKHENLSNEIDRVKKENDSMQIELRHLKGEDINSLNYKELMALEEALDNGLNGVREKKGKTLEEENRELN 151
               7899***********************************************************************999886 PP
Sequence ? help Back to Top
Protein Sequence    Length: 171 aa     Download sequence    
MGRGKIEIKR IENSSNRQVT YSKRKNGILK KAKEITVLCD AQVSLIIFGS SGKMHEYISP  60
TTTLIDVLAK YHKASGKRLW DTKHENLSNE IDRVKKENDS MQIELRHLKG EDINSLNYKE  120
LMALEEALDN GLNGVREKKG KTLEEENREL NFLLQQHMAL EGARNMHGQW I
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G20240.12e-68MIKC_MADS family protein