PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIV96809
Organism
Lupinus angustifolius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
Family M-type_MADS
Protein Properties Length: 164aa    MW: 18942.7 Da    PI: 5.0263
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIV96809genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF627e-201157349
              --SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS
    SRF-TF  3 ienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49
              +++   rqvtfskRr g++KKA+ELS++C+ e a+++fs+ +k y y
  OIV96809 11 VKDLNTRQVTFSKRRSGLFKKANELSIMCGCELAIVMFSHGNKPYSY 57
              566778***********************************998887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 164 aa     Download sequence    
MGRRKIEIKM VKDLNTRQVT FSKRRSGLFK KANELSIMCG CELAIVMFSH GNKPYSYGHP  60
NVDSVAAKIL HQELNSSAVQ CDSSSNDETL NKLSQELDDI LDQTYEEEKK GEELDKLIEQ  120
KKKELEKVED LSVYEEMRRS IKERINEMEA VEAMLMIKEQ EPIV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G34440.16e-35M-type_MADS family protein