PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIV96949

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

LBD

Protein Properties

Length: 186aa MW: 20685.4 Da PI: 5.7829

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIV96949	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	145.1	2e-45	11	110	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallkee 100 +CaaCk+lrrkC ++Cv+apyfp e+p+kfanvhk+FGasnv+kll++l +++reda++sl+yeAear+rdPvyG+vg i+ lq+q+++l++el+++++e OIV96949 11 PCAACKFLRRKCMPECVFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLPQQREDAVNSLAYEAEARVRDPVYGCVGAITFLQRQVQRLQKELDAANAE 110 7*********************************************************************************************999876 PP

Sequence ? help Back to Top
Protein Sequence Length: 186 aa Download sequence
MASSSCSYNS PCAACKFLRR KCMPECVFAP YFPPEEPQKF ANVHKIFGAS NVTKLLNELL 60 PQQREDAVNS LAYEAEARVR DPVYGCVGAI TFLQRQVQRL QKELDAANAE LLHYAYNEIS 120 PLPTSLAISP LTPLQQIPQR TQFGARIGNE GSGFYRQSPV TYSFPYSLPW NNDTSLEDIN 180 EGGGSL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G63090.2	9e-76	LBD family protein

Link Out ? help Back to Top
Ensembl	OIV96949