PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIV97837

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

MIKC_MADS

Protein Properties

Length: 192aa MW: 21952.2 Da PI: 9.9397

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIV97837	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	86.7	1.3e-27	10	59	2	51
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 ri+n++ rqvtfskRr g+lKKA+EL +LCdaev v+ifsstgkl+e+s+ OIV97837 10 RIDNSTSRQVTFSKRRSGLLKKAKELAILCDAEVGVVIFSSTGKLHEFSN 59 8***********************************************95 PP
2	K-box	62.1	2.2e-21	58	123	33	98
K-box 33 reqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 ++ R+++Ge+L+ L++keLq Le+qLe sl+ +R +K++ll+++i++l +k k +++en++L +k+ OIV97837 58 SNTRQMMGEELSGLTVKELQTLENQLEISLRGVRVQKDQLLMDEIQDLNQKGKLIHQENMELYRKV 123 578************************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 192 aa Download sequence
MGRGKIVIRR IDNSTSRQVT FSKRRSGLLK KAKELAILCD AEVGVVIFSS TGKLHEFSNT 60 RQMMGEELSG LTVKELQTLE NQLEISLRGV RVQKDQLLMD EIQDLNQKGK LIHQENMELY 120 RKVNLIHQEN TELQKKVYGT RDWNGRKRNS VLTNGLSIEA NLQVPVSLQL SQPQQQNYEE 180 PTEATKLGLQ LH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G57230.2	7e-69	MIKC_MADS family protein

Link Out ? help Back to Top
Ensembl	OIV97837