PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIV98053

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

LBD

Protein Properties

Length: 214aa MW: 23620.2 Da PI: 9.2445

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIV98053	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	133.2	1e-41	42	141	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallkee 100 +CaaCk+lrr+Ca++C+++pyf ++p+kfa vhk+FGasnv+k+l ++pe +r da++slvyeA++r+rdPvyG++g i++lqqq+++l+ael+++++e OIV98053 42 PCAACKLLRRRCAQECPFSPYFSPHDPQKFASVHKVFGASNVSKMLMEVPECHRADAANSLVYEANVRLRDPVYGCMGAISALQQQVQSLQAELNAVRSE 141 7***********************************************************************************************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 214 aa Download sequence
MSRERERFDE IGKKIKREGD VSSQMGRRHM LGPPGTLNTI IPCAACKLLR RRCAQECPFS 60 PYFSPHDPQK FASVHKVFGA SNVSKMLMEV PECHRADAAN SLVYEANVRL RDPVYGCMGA 120 ISALQQQVQS LQAELNAVRS EILKYKLREA NMIPSSHIAM FPSSGDVSVI ASPPPLPPPP 180 PLPPASSSSS SMYIQQRAPI NYSRISSDNI SYFG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G40470.1	1e-86	LBD family protein

Link Out ? help Back to Top
Ensembl	OIV98053