PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIV98192

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

Trihelix

Protein Properties

Length: 490aa MW: 55217.2 Da PI: 7.3878

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIV98192	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	73.9	2.7e-23	122	223	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgk...............lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr.tsessstcpyfdql 85 +W++ +v++Li a+ +++++ + ++ +kk++W++vs++m+e+gf +sp+qC++k+++lnkryk+++++ +k+ +++++++ ++d++ OIV98192 122 KWSDTMVRLLIMAVYYIGDEGGGSEttdpngkkkpsggllQKKGKWKSVSRAMMEKGFYVSPQQCEDKFNDLNKRYKRVNDILGKGtACRVVENQNLLDSI 222 7************9999999776667888899999999********************************************559999999998887 PP trihelix 86 e 86 e OIV98192 223 E 223 5 PP

Sequence ? help Back to Top
Protein Sequence Length: 490 aa Download sequence
MEPNGLGGGM FSSMTNSALL GVENTLQQQN LTNPQNTQHL HHSQMVSYAN SHQEDQQQQH 60 QSIKLGFPPY LAKKQQSTTT TTMSDEDEPG GGGVGVTGDD NNNSPKRKVS SSSTSSPWQR 120 MKWSDTMVRL LIMAVYYIGD EGGGSETTDP NGKKKPSGGL LQKKGKWKSV SRAMMEKGFY 180 VSPQQCEDKF NDLNKRYKRV NDILGKGTAC RVVENQNLLD SIELEPKMKE EVRKLLNSKH 240 LFFREMCAYH NSCGHGGGSS GNSVPQQQVE VGIDASQCAQ QKRGCSHSSE NGGVNFGGTE 300 QEGMRMLKVG NSKENYNDDE DNSDDSNGED NSDDSGEDEN ESAGGSREDD DGHDRKLRNK 360 RTRIASGLGL GSGSRSFSMS SQLMQQLNIE VSNVFQDGGR SAWEKKHWMR LRIMQLEEQH 420 IKYQSEAFEL DKQRLKWVRF SSKKERDMEK AKIENERRRL ENERMILLIR QKELELMKLH 480 RLQQQQRSST

Sequence ? help Back to Top

Protein Sequence Length: 490 aa Download sequence

MEPNGLGGGM FSSMTNSALL GVENTLQQQN LTNPQNTQHL HHSQMVSYAN SHQEDQQQQH  60
QSIKLGFPPY LAKKQQSTTT TTMSDEDEPG GGGVGVTGDD NNNSPKRKVS SSSTSSPWQR  120
MKWSDTMVRL LIMAVYYIGD EGGGSETTDP NGKKKPSGGL LQKKGKWKSV SRAMMEKGFY  180
VSPQQCEDKF NDLNKRYKRV NDILGKGTAC RVVENQNLLD SIELEPKMKE EVRKLLNSKH  240
LFFREMCAYH NSCGHGGGSS GNSVPQQQVE VGIDASQCAQ QKRGCSHSSE NGGVNFGGTE  300
QEGMRMLKVG NSKENYNDDE DNSDDSNGED NSDDSGEDEN ESAGGSREDD DGHDRKLRNK  360
RTRIASGLGL GSGSRSFSMS SQLMQQLNIE VSNVFQDGGR SAWEKKHWMR LRIMQLEEQH  420
IKYQSEAFEL DKQRLKWVRF SSKKERDMEK AKIENERRRL ENERMILLIR QKELELMKLH  480
RLQQQQRSST

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10040.1	3e-59	Trihelix family protein

Link Out ? help Back to Top
Ensembl	OIV98192