PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIV98380

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

bHLH

Protein Properties

Length: 606aa MW: 68164.5 Da PI: 9.1205

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIV98380	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	37.2	5.3e-12	447	492	4	54
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 h + ErrRR+++N+ f+ Lr llP+ +K +Ka+iL+ A e +ksL OIV98380 447 HHMISERRRREKLNENFQALRALLPPK-----TKKDKASILTSAKETLKSL 492 68899******************98.....8***********99998 PP

Sequence ? help Back to Top
Protein Sequence Length: 606 aa Download sequence
MVKNNYPFST YFILLLITIT RLISTVSKTE QWKTLLPPKL ATLESISHKL QDDPEAIKSA 60 SKDYGNLVHN FPLAVFHPSS IYDIVSLVKH SYNSSNPFNI AARGQGHSTR GQAMASDGVV 120 VDMAGFRERR NGVGISVILD PFVESYYYYA DVGGEQLWID VLYKSLEYGL APVSWTDYLY 180 LTVGGTLSNA GISGQTFHYG PQISNVHEMD VITADHPRII SLVTKHSVLY CLELAKYHHA 240 QSHNNVDKDD IQTTLRSLFP EEFYRQTQPI IDPNQPSSSS SSLRSLSTGS PEYSSLIFNI 300 HGTSQPNFPE TLRGVITTMP LVTPNITTSS IHQQVPQITL SPIHQLPTPE NEQDAIMRAM 360 LYVLTSPTSS TSHQKQTHQN LPYTNPETSS AFKSYRPSLG PNNMSLIGSN IRKQSMMNRS 420 FVFFRKLNLS RMREHIQATH SNSTQVHHMI SERRRREKLN ENFQALRALL PPKTKKDKAS 480 ILTSAKETLK SLMVEIEKLS LRNQELVSLV ATKESSTQET KASFSSNERL NVRVSHIPQS 540 NSSEERMVEL KVNLRGQVSQ VDILIGLLEF LKQTQNVSLI SMEATQGNAL HQLNFTLRIV 600 EVCIYL

Sequence ? help Back to Top

Protein Sequence Length: 606 aa Download sequence

MVKNNYPFST YFILLLITIT RLISTVSKTE QWKTLLPPKL ATLESISHKL QDDPEAIKSA  60
SKDYGNLVHN FPLAVFHPSS IYDIVSLVKH SYNSSNPFNI AARGQGHSTR GQAMASDGVV  120
VDMAGFRERR NGVGISVILD PFVESYYYYA DVGGEQLWID VLYKSLEYGL APVSWTDYLY  180
LTVGGTLSNA GISGQTFHYG PQISNVHEMD VITADHPRII SLVTKHSVLY CLELAKYHHA  240
QSHNNVDKDD IQTTLRSLFP EEFYRQTQPI IDPNQPSSSS SSLRSLSTGS PEYSSLIFNI  300
HGTSQPNFPE TLRGVITTMP LVTPNITTSS IHQQVPQITL SPIHQLPTPE NEQDAIMRAM  360
LYVLTSPTSS TSHQKQTHQN LPYTNPETSS AFKSYRPSLG PNNMSLIGSN IRKQSMMNRS  420
FVFFRKLNLS RMREHIQATH SNSTQVHHMI SERRRREKLN ENFQALRALL PPKTKKDKAS  480
ILTSAKETLK SLMVEIEKLS LRNQELVSLV ATKESSTQET KASFSSNERL NVRVSHIPQS  540
NSSEERMVEL KVNLRGQVSQ VDILIGLLEF LKQTQNVSLI SMEATQGNAL HQLNFTLRIV  600
EVCIYL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	452	457	ERRRRE
2	453	458	RRRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G56960.1	5e-50	bHLH family protein

Link Out ? help Back to Top
Ensembl	OIV98380