PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIV98616

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

MYB

Protein Properties

Length: 234aa MW: 26923.4 Da PI: 6.6712

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIV98616	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	52.5	1.1e-16	5	50	3	48
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +WT+eEd l+++++q+G g W++++ g++R++k+c++rw++yl OIV98616 5 AWTEEEDHMLKKCIEQYGEGKWHRVPLLAGLNRCRKSCRLRWLNYL 50 7*******************************************97 PP
2	Myb_DNA-binding	47.6	3.8e-15	56	100	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg++ +eE e +++++++lG++ W++Ia +++ gRt++++k++w+ + OIV98616 56 RGSFAEEEVEMIIKLHRLLGNR-WSLIAGRLP-GRTANDVKNYWNCH 100 78999***************.*****.*********977 PP

Sequence ? help Back to Top
Protein Sequence Length: 234 aa Download sequence
MGGVAWTEEE DHMLKKCIEQ YGEGKWHRVP LLAGLNRCRK SCRLRWLNYL RPNIKRGSFA 60 EEEVEMIIKL HRLLGNRWSL IAGRLPGRTA NDVKNYWNCH LSKKLNALEA KNTKMNRNIE 120 SIRPNQPRII IGSSSLKRRS LQSESSTEQG TQQQESAISS LTFDPERESH ILEPQQENMY 180 SCLDQQGIID ELPMDFKYEG VDAMNSGVGS SSSTNQWDWD DLLLDMDLYN GFSS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G66370.1	3e-58	MYB family protein

Link Out ? help Back to Top
Ensembl	OIV98616