PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIV98623

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

C2H2

Protein Properties

Length: 284aa MW: 32304.7 Da PI: 8.1237

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIV98623	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13.6	0.0002	61	83	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C + F++ L H+++H OIV98623 61 YSCSFCRREFRSAQALGGHMNVH 83 99*******************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 284 aa Download sequence
MDEQGQYKMC TKRKYSMTSN HTSSSPNNND YPSSYDDSSW EEQAFAKDAA GLGCIWPPRS 60 YSCSFCRREF RSAQALGGHM NVHRRDRARL NQQPSSPKQN EILNHQVQNP LTSSYLYPSS 120 SLFGLANTNN TNPNYSDPPH DLASSSKVLT PSVNKNFREE TLSIPLYNSS IFHKTYPTLS 180 SNSLSNQAEP CVDRISKGWN NDNTDVAVSF NLNFVCRAYT PMQFETKEED LLSFKKKRKD 240 ASNPFFPKSG SVETHQKQSH MFEFSPSSIE ELDLELRLGY RSKV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G37740.1	1e-25	C2H2 family protein

Link Out ? help Back to Top
Ensembl	OIV98623