PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIV98677
Organism
Lupinus angustifolius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
Family GATA
Protein Properties Length: 245aa    MW: 27242.4 Da    PI: 6.362
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIV98677genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA61.31.2e-19175209135
      GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
               C++Cg+ kTp+WR gp g+ktLCnaCG++y++ +l
  OIV98677 175 CQHCGAEKTPQWRAGPLGPKTLCNACGVRYKSGRL 209
               *******************************9885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 245 aa     Download sequence    
MEAIGSVDEL LDFSLDVGEV DDDDDKNRKA FPKLDLKCSD PPSLSPLDLG DPSPPFSEFA  60
EEELEWLSNK DAFPEVETFV DLPSIQPNLS KHETGSMLEY STSSSNSNNS PNSISLLSGY  120
DNLNVPVRPR SKSRSRSRHL ASNSGISSQQ SWWRQPINES AKLEVITMST IGRKCQHCGA  180
EKTPQWRAGP LGPKTLCNAC GVRYKSGRLV PEYRPASSPS FRSDLHSNSH RKVMEMRKQK  240
QIGMT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24050.18e-43GATA family protein