PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIV98728

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

C2H2

Protein Properties

Length: 527aa MW: 57106.9 Da PI: 7.2189

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIV98728	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	10.7	0.0017	217	235	3	21
ETTTTEEESSHHHHHHHHH CS zf-C2H2 3 CpdCgksFsrksnLkrHir 21 C++C+ ++++++L++Hi+ OIV98728 217 CEICKAECNSPEMLQQHIN 235 *****************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 527 aa Download sequence
MDSSNSQQQQ QHHHHEYDPS QMQAYDPSSQ QYYHHHHHDY NNNNNNNNQQ QNQYYQDQIL 60 VHPPGVAIAP EPDHSAGSSQ TQQLNPVQGA SDAGLLNPGV VVGNLTQLSQ YAGNVDGVLP 120 VMYEQIGPSQ YRGRGHRGGR RGGRGHFNHR GRAPYRGGRG RVVGDGRHFP SNVAEAPAAE 180 GTSVVQPESL ISGQVSLPDP TQAPTAKLQL PPAKLWCEIC KAECNSPEML QQHINGKRHK 240 KNFLVHEELQ RRKAVNGQLS GQISTSELNL TIQPESVQES KTDNPKDETE LQNIVGGTSE 300 VLAEAPVGEP DNNSAGRGRG GLKNKRRGRG SKYMRSNDGS RIAVEPKQAI SFICELCNVK 360 CESQVVYNSH MIGKKHMSNF KRVHGHQAVN LEAAAQHNPP NANDLSNSNN SLVHQGVSDP 420 QLLLAQLLMT VQSVLSQVQV PAVALPSGPV AGQIQTVAGS SHDHLQNLSQ TQVSGSTAHV 480 DSENLNGVGE TKIQPLSAPP ELNATIAGLS NDTQTTDGRS ETEKKVL

Sequence ? help Back to Top

Protein Sequence Length: 527 aa Download sequence

MDSSNSQQQQ QHHHHEYDPS QMQAYDPSSQ QYYHHHHHDY NNNNNNNNQQ QNQYYQDQIL  60
VHPPGVAIAP EPDHSAGSSQ TQQLNPVQGA SDAGLLNPGV VVGNLTQLSQ YAGNVDGVLP  120
VMYEQIGPSQ YRGRGHRGGR RGGRGHFNHR GRAPYRGGRG RVVGDGRHFP SNVAEAPAAE  180
GTSVVQPESL ISGQVSLPDP TQAPTAKLQL PPAKLWCEIC KAECNSPEML QQHINGKRHK  240
KNFLVHEELQ RRKAVNGQLS GQISTSELNL TIQPESVQES KTDNPKDETE LQNIVGGTSE  300
VLAEAPVGEP DNNSAGRGRG GLKNKRRGRG SKYMRSNDGS RIAVEPKQAI SFICELCNVK  360
CESQVVYNSH MIGKKHMSNF KRVHGHQAVN LEAAAQHNPP NANDLSNSNN SLVHQGVSDP  420
QLLLAQLLMT VQSVLSQVQV PAVALPSGPV AGQIQTVAGS SHDHLQNLSQ TQVSGSTAHV  480
DSENLNGVGE TKIQPLSAPP ELNATIAGLS NDTQTTDGRS ETEKKVL

Link Out ? help Back to Top
Ensembl	OIV98728