PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIV98740

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

MIKC_MADS

Protein Properties

Length: 210aa MW: 23969.1 Da PI: 8.4798

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIV98740	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	96.9	8.3e-31	9	59	1	51
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien + rqvtfskRrng+lKKA+ELSvLCdaeva+iifs++gklye+ss OIV98740 9 KRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSS 59 79***********************************************96 PP
2	K-box	79.7	7e-27	77	171	5	98
K-box 5 sgks.leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 ++++ +e+++++l++e ++L k+ie L+ ++ +llGe+L+s+sl+eLq +e+qLeks+ ++R++K+++++eqie+l++kek+l en +L++++ OIV98740 77 QTSHvSDEQNMQHLKHETENLMKKIELLEASKGKLLGEGLGSCSLEELQDIENQLEKSVCNVRARKTQVYKEQIEHLKEKEKALIAENVRLSEQY 171 333357899**********************************************************************************9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 210 aa Download sequence
MVRGKTQMKR IENATSRQVT FSKRRNGLLK KAFELSVLCD AEVALIIFSP RGKLYEFSSS 60 SMQETIERFR RHTRSSQTSH VSDEQNMQHL KHETENLMKK IELLEASKGK LLGEGLGSCS 120 LEELQDIENQ LEKSVCNVRA RKTQVYKEQI EHLKEKEKAL IAENVRLSEQ YGNQPKAETK 180 DQKENQGNAE SSSPGTDVET ELFIGLHRSS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45660.1	1e-77	MIKC_MADS family protein

Link Out ? help Back to Top
Ensembl	OIV98740