PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIV98854

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

GRF

Protein Properties

Length: 599aa MW: 65412.1 Da PI: 6.7492

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIV98854	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	77.2	1.7e-24	224	268	1	45
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+epgrCrRtDGKkWRCsr+++ ++k+CErH++rgr+rsrk++e+ OIV98854 224 DPEPGRCRRTDGKKWRCSRDAVVDQKYCERHMNRGRHRSRKPVEQ 268 79****************************************997 PP
2	QLQ	62.6	1e-21	155	190	2	37
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 FT++Q+++L++Q+l+yKy+ an+PvP++Ll++i+k OIV98854 155 LFTPSQWMELEHQALIYKYITANVPVPSHLLFPIRK 190 6*********************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 599 aa Download sequence
MDLGVVGFDG LVGSNTTTTT TTSDDGFVSL ALDPETKYKG YGSGGFLKQE RSSTITNEDE 60 WRSSKVAKTH GDLFASSSCS KPMLLQERDS LLRSNSSNNN NATLFCDGQQ MLSFSSPKSE 120 TSSNATLHFS YHPYSRDTGY SSGGMHGAIT GSRGLFTPSQ WMELEHQALI YKYITANVPV 180 PSHLLFPIRK ALDSAGFCNF SNGVFRSNAL GWGAFHLGFS NSTDPEPGRC RRTDGKKWRC 240 SRDAVVDQKY CERHMNRGRH RSRKPVEQGQ LGHAGIATTT VTTTTPNATT NNNNGCSSSL 300 SSLMPVNCAS STLTIVPHQE HKNTQHPLAS NTSPANSINR IFMNNNEENN ASERMQDSLA 360 IPMLPPTLEL RPKENIRFMI HKQQIQSYEE STRNDNEFGL VTSDSLLNPS QKSSTFLNTK 420 TFSPSSQNQD TEPQHSLRHF IDDCPNDDMQ SDQTQLSISI PMAASSDFMS FSSSTTNEKL 480 TLSPLRLSRE LDPIQMCLGV GSGINESNTR QANWVPITWE SCSMGGPLGE VLNLSNNNNN 540 ASEHCSRNSS ALNLMTEGWD NSPPIGSSSP TGILQKTAFG SLSNSSAGSS PRADNNNKI

Sequence ? help Back to Top

Protein Sequence Length: 599 aa Download sequence

MDLGVVGFDG LVGSNTTTTT TTSDDGFVSL ALDPETKYKG YGSGGFLKQE RSSTITNEDE  60
WRSSKVAKTH GDLFASSSCS KPMLLQERDS LLRSNSSNNN NATLFCDGQQ MLSFSSPKSE  120
TSSNATLHFS YHPYSRDTGY SSGGMHGAIT GSRGLFTPSQ WMELEHQALI YKYITANVPV  180
PSHLLFPIRK ALDSAGFCNF SNGVFRSNAL GWGAFHLGFS NSTDPEPGRC RRTDGKKWRC  240
SRDAVVDQKY CERHMNRGRH RSRKPVEQGQ LGHAGIATTT VTTTTPNATT NNNNGCSSSL  300
SSLMPVNCAS STLTIVPHQE HKNTQHPLAS NTSPANSINR IFMNNNEENN ASERMQDSLA  360
IPMLPPTLEL RPKENIRFMI HKQQIQSYEE STRNDNEFGL VTSDSLLNPS QKSSTFLNTK  420
TFSPSSQNQD TEPQHSLRHF IDDCPNDDMQ SDQTQLSISI PMAASSDFMS FSSSTTNEKL  480
TLSPLRLSRE LDPIQMCLGV GSGINESNTR QANWVPITWE SCSMGGPLGE VLNLSNNNNN  540
ASEHCSRNSS ALNLMTEGWD NSPPIGSSSP TGILQKTAFG SLSNSSAGSS PRADNNNKI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22840.1	6e-90	GRF family protein

Link Out ? help Back to Top
Ensembl	OIV98854