PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIV98972

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

MYB

Protein Properties

Length: 319aa MW: 36600.4 Da PI: 6.642

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIV98972	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	47.9	3.1e-15	18	65	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++eEde+l++ G g+W+ Iar g+ R++k+c++rw +yl OIV98972 18 KGLWSPEEDEKLIRHMLTNGQGCWSDIARNAGLLRCGKSCRLRWINYL 65 678***************************99**********97 PP
2	Myb_DNA-binding	50.4	5e-16	71	115	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+++++E++l+++++ +lG++ W++Ia+++ +Rt++++k++w++ OIV98972 71 RGAFSPQEEDLIIQLHSLLGNR-WSKIAAHLS-RRTDNEIKNFWNST 115 89******************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 319 aa Download sequence
MRKPDMMGKD NIKSKLRKGL WSPEEDEKLI RHMLTNGQGC WSDIARNAGL LRCGKSCRLR 60 WINYLRPDLK RGAFSPQEED LIIQLHSLLG NRWSKIAAHL SRRTDNEIKN FWNSTLKKKM 120 KMNTSTTSPN NSNESYEPND ILGGIMPINE HDLITMCMDC STSTSSSSMQ SMVSADQFDP 180 FSMLIKNNHY DMTNVSAGFH EIAPCMNQVG MVERHHGNYG ILEPNNKMGL LEREFSLPTL 240 ESRNIEENSA LIDVKSHNNH FTNSCFNNIN RIQSSKVEDL FGFGNHGHRV ENLTMGEWDL 300 ECLMQDIFSF PFLDFQVDQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G08500.1	8e-62	MYB family protein

Link Out ? help Back to Top
Ensembl	OIV98972