PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIV99127

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

TCP

Protein Properties

Length: 570aa MW: 64035.9 Da PI: 7.6598

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIV99127	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	123.7	2e-38	173	303	2	113
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg............. 88 +g+kdrhsk++T++g+RdRRvRlsa++a++f+d+qd+LG+d++sk+++WL+++ak+ai++l+++++ ++++ e ++++++++++++ OIV99127 173 TGRKDRHSKVCTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKAAIDQLAELPAWNPTAImE--QQQQQQQQQQINeifhrdtpaaedg 271 79**************************************************************7777755532..3333333334445678888888888 PP TCP 89 .......kaaksaakskksqksaasalnlake 113 ++ + ++++++q++ +n +++ OIV99127 272 litgsscRNVSGRMSEEFQQQQFVDENNNNDN 303 88888873333333333333333322232222 PP

Sequence ? help Back to Top
Protein Sequence Length: 570 aa Download sequence
MELGKLNGRN NFWKKQQVSE LWQWQKQQQE LQAQKESESG KKQTRNQRQQ QQQQHQQHHH 60 QNPPLVQNSR HHVGEEREDE ENRDSSHQNQ DSTFQYLQQP HQQLQKQSHV ALNTNSLSPP 120 LKKRSFHLPP PHPLPLSSPP STTKYATRGM RSTTSTGVGE IVEVQGGHIV RSTGRKDRHS 180 KVCTAKGPRD RRVRLSAHTA IQFYDVQDRL GYDRPSKAVD WLIKKAKAAI DQLAELPAWN 240 PTAIMEQQQQ QQQQQQINEI FHRDTPAAED GLITGSSCRN VSGRMSEEFQ QQQFVDENNN 300 NDNNSNKYNS AGSGFLPPSM DTDITDTIKS FFPMVAAAET TTSFNNYSTP PDLLSRTTST 360 AANHNHQQDL RLSLHSFQDP ILLHHHQQQQ QNQNQTQNQN QQVLFNGINT LGFDGGGSSG 420 WLEQHHQHEQ EHGRFHRMVA WNAAAADDSH SGGGFVFNSP PPSTVAPAAM FGHHGQYFSQ 480 RGPLQSSNTP SIRAWIDSNS LATAATVAAV SHPHYHHHYL SPSIHQASAT GFASPYGGFS 540 GFRIPARIQG EEEHDGVSDK PSSASSDSRH

Sequence ? help Back to Top

Protein Sequence Length: 570 aa Download sequence

MELGKLNGRN NFWKKQQVSE LWQWQKQQQE LQAQKESESG KKQTRNQRQQ QQQQHQQHHH  60
QNPPLVQNSR HHVGEEREDE ENRDSSHQNQ DSTFQYLQQP HQQLQKQSHV ALNTNSLSPP  120
LKKRSFHLPP PHPLPLSSPP STTKYATRGM RSTTSTGVGE IVEVQGGHIV RSTGRKDRHS  180
KVCTAKGPRD RRVRLSAHTA IQFYDVQDRL GYDRPSKAVD WLIKKAKAAI DQLAELPAWN  240
PTAIMEQQQQ QQQQQQINEI FHRDTPAAED GLITGSSCRN VSGRMSEEFQ QQQFVDENNN  300
NDNNSNKYNS AGSGFLPPSM DTDITDTIKS FFPMVAAAET TTSFNNYSTP PDLLSRTTST  360
AANHNHQQDL RLSLHSFQDP ILLHHHQQQQ QNQNQTQNQN QQVLFNGINT LGFDGGGSSG  420
WLEQHHQHEQ EHGRFHRMVA WNAAAADDSH SGGGFVFNSP PPSTVAPAAM FGHHGQYFSQ  480
RGPLQSSNTP SIRAWIDSNS LATAATVAAV SHPHYHHHYL SPSIHQASAT GFASPYGGFS  540
GFRIPARIQG EEEHDGVSDK PSSASSDSRH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G53230.1	2e-74	TCP family protein

Link Out ? help Back to Top
Ensembl	OIV99127