PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIV99256

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

C2H2

Protein Properties

Length: 467aa MW: 51086 Da PI: 8.6649

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIV99256	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14.6	9.3e-05	58	78	3	23
ETTTTEEESSHHHHHHHHHHT CS zf-C2H2 3 CpdCgksFsrksnLkrHirtH 23 C+ Cgk F r nL+ H r H OIV99256 58 CETCGKGFQRDQNLQLHRRGH 78 *******************88 PP
2	zf-C2H2	12	0.00064	132	154	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C+k++ +s+ k H +t+ OIV99256 132 WKCDKCSKCYAVQSDWKAHSKTC 154 58*****************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 467 aa Download sequence
MDDGEVSNGF PLNPTTGSSN NSDPVLKRKR NLPGNPDPEA EVIALSPKTL MATNRFLCET 60 CGKGFQRDQN LQLHRRGHNL PWKLKQRTSK EVRKRVYVCP EKTCVHHNPA RALGDLTGIK 120 KHFCRKHGEK KWKCDKCSKC YAVQSDWKAH SKTCGTKEYK CDCGTIFSRR DSFITHRAFC 180 DALAEETARV NATSSISNSL GPNFSYNIMG TPQGPNMATH FSSIFKPVSS IDHETSNQTS 240 RGLSLWMDQL SHQAHETKVN ENIHQLGSAP NSGSAIYGEN PEFSQCSNNH SPSNNYHLNW 300 VFGTKPSSNS TLELITSTTT SLPLGNIIKD ATCTSQLISV PSLYSSQHQS HQTSSATNMS 360 ATALLQKAAQ IGATSTTDPS FLGSLGLKCS NNQGQDGNKI FQMYGSSSVP TSFGSEAENS 420 ACDLSQMHPA KRRHVQKEEG PGGGQTRDFL GVGVQTLCHP SSINGWM

Sequence ? help Back to Top

Protein Sequence Length: 467 aa Download sequence

MDDGEVSNGF PLNPTTGSSN NSDPVLKRKR NLPGNPDPEA EVIALSPKTL MATNRFLCET  60
CGKGFQRDQN LQLHRRGHNL PWKLKQRTSK EVRKRVYVCP EKTCVHHNPA RALGDLTGIK  120
KHFCRKHGEK KWKCDKCSKC YAVQSDWKAH SKTCGTKEYK CDCGTIFSRR DSFITHRAFC  180
DALAEETARV NATSSISNSL GPNFSYNIMG TPQGPNMATH FSSIFKPVSS IDHETSNQTS  240
RGLSLWMDQL SHQAHETKVN ENIHQLGSAP NSGSAIYGEN PEFSQCSNNH SPSNNYHLNW  300
VFGTKPSSNS TLELITSTTT SLPLGNIIKD ATCTSQLISV PSLYSSQHQS HQTSSATNMS  360
ATALLQKAAQ IGATSTTDPS FLGSLGLKCS NNQGQDGNKI FQMYGSSSVP TSFGSEAENS  420
ACDLSQMHPA KRRHVQKEEG PGGGQTRDFL GVGVQTLCHP SSINGWM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G03840.1	1e-147	C2H2 family protein

Link Out ? help Back to Top
Ensembl	OIV99256