PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIV99280

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

C2H2

Protein Properties

Length: 323aa MW: 37365.6 Da PI: 8.3758

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIV99280	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	17.3	1.3e-05	155	174	1	20
EEETTTTEEESSHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHi 20 + C++C+k+F+r n++ H+ OIV99280 155 FACNICSKTFNRYNNMQMHM 174 78*****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 323 aa Download sequence
MGLREYNNIV EDKNLYLHSP TFIEWLKPFN SSPSYLTPTV SSSMSSPSSV TQNDLVHETI 60 QFFPILKGKP SRDEELKKKV PEVKEEKVEQ MTVALHIGLP NTTNDIIEHD HDEKKVFHVK 120 EEEEEPLKEK IFHGSSERRF WIPSPAQILV GPMQFACNIC SKTFNRYNNM QMHMWGHGSE 180 YRKGPDSLRG TQPAAMLRLP CYCCAQGCKN SINHPRAKPL KDFRTLQTHY KRKHGTKPFT 240 CRKCCKTFAV KGDWRTHEKN CGKLWYCSCG SDFKHKRSLK DHVRSFGKGH YPRPNSIEEL 300 LEDEKDCITG SDEDHDVAHN MII

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G08290.1	1e-108	C2H2 family protein

Link Out ? help Back to Top
Ensembl	OIV99280