PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIV99338

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

C2H2

Protein Properties

Length: 393aa MW: 44424.5 Da PI: 8.3296

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIV99338	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16.6	2.3e-05	6	28	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C++C+k F r nL+ H r H OIV99338 6 FICEICNKGFQRDQNLQLHRRGH 28 89*******************88 PP
2	zf-C2H2	12.3	0.00052	83	105	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC++C+k + +s+ k H + + OIV99338 83 WKCEKCSKKYAVQSDWKAHSKIC 105 58*****************9876 PP

Sequence ? help Back to Top
Protein Sequence Length: 393 aa Download sequence
MATNRFICEI CNKGFQRDQN LQLHRRGHNL PWKLKQRTNK DPVRKKVYVC PEKSCLHHDP 60 CRALGDLTGI KKHYSRKHGE KKWKCEKCSK KYAVQSDWKA HSKICGTREY KCDCGTLFSR 120 KDSFVTHRSF CDTLTQECVK VPSAISNLRS INLTNNNTQV PRIPQSFPEF HSEFGGKLSA 180 FSSNANTVPC THMSDLVETM NMFGSTPQQT QWLNYQASFT NGNNNNLSMP LSALLPHGLK 240 QEQEENKQDL SHTAANSVYF MSATSLFNTD NSSSTFNNNN NNHNVFGLMG SNILSNTSRI 300 NNNNIVEVQK FFKEGNLNHG QMNFEGNSTN YEGGFSMDDS SSNNNKDQLG LTRDFLGVGD 360 ESITISRPFD LAEFNAMGSA MEVNNSHYDG HYC

Sequence ? help Back to Top

Protein Sequence Length: 393 aa Download sequence

MATNRFICEI CNKGFQRDQN LQLHRRGHNL PWKLKQRTNK DPVRKKVYVC PEKSCLHHDP  60
CRALGDLTGI KKHYSRKHGE KKWKCEKCSK KYAVQSDWKA HSKICGTREY KCDCGTLFSR  120
KDSFVTHRSF CDTLTQECVK VPSAISNLRS INLTNNNTQV PRIPQSFPEF HSEFGGKLSA  180
FSSNANTVPC THMSDLVETM NMFGSTPQQT QWLNYQASFT NGNNNNLSMP LSALLPHGLK  240
QEQEENKQDL SHTAANSVYF MSATSLFNTD NSSSTFNNNN NNHNVFGLMG SNILSNTSRI  300
NNNNIVEVQK FFKEGNLNHG QMNFEGNSTN YEGGFSMDDS SSNNNKDQLG LTRDFLGVGD  360
ESITISRPFD LAEFNAMGSA MEVNNSHYDG HYC

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	33	46	KLKQRTNKDPVRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G45260.1	5e-80	C2H2 family protein

Link Out ? help Back to Top
Ensembl	OIV99338