PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIV99347

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

LBD

Protein Properties

Length: 204aa MW: 22395.5 Da PI: 5.6462

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIV99347	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	139.2	1.4e-43	37	136	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallkee 100 +CaaCk+lrr+Ca++Cvlapyfp +qp+kf ++h++FGasn++kll++lpe++r da+ss+vyeA ar+rdPvyG++gvi +lq+q+++l+a+la++++e OIV99347 37 PCAACKILRRRCAEKCVLAPYFPPTQPAKFTIAHRVFGASNIIKLLQELPESQRADAVSSMVYEASARIRDPVYGCAGVICNLQNQVNELQAQLAKAQAE 136 7**********************************************************************************************99976 PP

Sequence ? help Back to Top
Protein Sequence Length: 204 aa Download sequence
MKSCDTSTPV SSTLLSQSPT NSSSSFPITP PQVVMIPCAA CKILRRRCAE KCVLAPYFPP 60 TQPAKFTIAH RVFGASNIIK LLQELPESQR ADAVSSMVYE ASARIRDPVY GCAGVICNLQ 120 NQVNELQAQL AKAQAEVVNM QVQQANLMAL ICMDVAQSPH ELSPQQSMDN FISSPPHSSD 180 YQSSANFYEE NSSLNLLWDQ PLWT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G07900.1	4e-66	LBD family protein

Link Out ? help Back to Top
Ensembl	OIV99347