PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIV99413

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

MIKC_MADS

Protein Properties

Length: 201aa MW: 22774.5 Da PI: 7.6208

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIV99413	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	80.8	9.2e-26	9	58	1	50
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50 krien rqvtf+kRr+g+lKKA+ELSvLCda++ ++ifs +gklye + OIV99413 9 KRIENPVHRQVTFCKRRAGLLKKAKELSVLCDADIGLVIFSAHGKLYELA 58 79*********************************************965 PP
2	K-box	67.9	3.5e-23	91	174	17	100
K-box 17 lqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 ++e + Lk+eie+Lq+ + l G +++++++ eLq Le++Le+ + +iRs K++++l++i+ l+ ke l+ +nk+L++k++e OIV99413 91 AKEETDVLKQEIETLQKGIGYLFGGGIGTMTMDELQVLEKNLENWIYHIRSMKMNIMLQEIQALRDKEGTLEAANKYLHNKIME 174 5799*****************************************************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 201 aa Download sequence
MARGRVQLKR IENPVHRQVT FCKRRAGLLK KAKELSVLCD ADIGLVIFSA HGKLYELATK 60 GTMQGLIERY MKFTRGSQPE GATEAHPPLD AKEETDVLKQ EIETLQKGIG YLFGGGIGTM 120 TMDELQVLEK NLENWIYHIR SMKMNIMLQE IQALRDKEGT LEAANKYLHN KIMENTAIAD 180 FAPFTTDTMY PLIIQDGVFQ L

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G71692.1	8e-73	MIKC_MADS family protein

Link Out ? help Back to Top
Ensembl	OIV99413