PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIV99550

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

MYB

Protein Properties

Length: 271aa MW: 30433.3 Da PI: 9.7342

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIV99550	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	52.7	9.5e-17	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l+ +++ +G g+W++ ++ g+ R++k+c++rw +yl OIV99550 14 KGAWTKEEDDRLISYIRSHGEGSWRSLPKAAGLLRCGKSCRLRWINYL 61 79****************************99**********97 PP
2	Myb_DNA-binding	59.7	6.5e-19	67	111	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg++T+eEdel ++++ +lG++ W++Ia++++ gRt++++k++w+++ OIV99550 67 RGNFTEEEDELVIKLHSLLGNK-WSLIAARLP-GRTDNEIKNYWNTH 111 89******************.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 271 aa Download sequence
MGRSPCCEKA HTNKGAWTKE EDDRLISYIR SHGEGSWRSL PKAAGLLRCG KSCRLRWINY 60 LRPDLKRGNF TEEEDELVIK LHSLLGNKWS LIAARLPGRT DNEIKNYWNT HIRRKLMSRG 120 IDPATHRPLN DAENRVQDHE VKASVAATNT ISFASSASAA AVVVKQEQDP SITSKSSMFG 180 VVDGKGTLLE RCPDLNLELT ISPPRLNEPE QPFKNMDRSI FFGYNLGMQN SNDSSDIGNS 240 TSSGKRNSTS TGYDFLGLKT GVWDYRRLKM K

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G16720.1	1e-100	MYB family protein

Link Out ? help Back to Top
Ensembl	OIV99550