PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIV99673
Organism
Lupinus angustifolius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
Family MIKC_MADS
Protein Properties Length: 261aa    MW: 29914.3 Da    PI: 7.5487
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIV99673genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF86.81.2e-27959151
              S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
    SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
              k+ien   rqvtfskRr g+lKKA+EL +LCdae+aviifs+tgkl+e+ss
  OIV99673  9 KKIENANSRQVTFSKRRSGLLKKAHELAILCDAEIAVIIFSNTGKLFEFSS 59
              68***********************************************96 PP
2K-box49.32.1e-171001791787
     K-box  17 lqqelakLkkeienLq.........reqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekel 87 
                ++ ++ Lk+eie+L+            R+llG+dL+ L ++eL++Le+qL+++l  +R++K+ell++qie+++ + +e+
  OIV99673 100 ESKMVEILKDEIEKLEteqfinvstGDFRRLLGKDLTGLGIEELKHLEHQLNEGLLAVRERKEELLMQQIEQSRIQVEEI 179
               3344445555555555333322324567********************************************99887765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 261 aa     Download sequence    
MGRGKIEIKK IENANSRQVT FSKRRSGLLK KAHELAILCD AEIAVIIFSN TGKLFEFSSS  60
VMKRTLSRYN ECNISSDATV VEYRKEIVMS NNKFSLQKEE SKMVEILKDE IEKLETEQFI  120
NVSTGDFRRL LGKDLTGLGI EELKHLEHQL NEGLLAVRER KEELLMQQIE QSRIQVEEIR  180
CLFPLTERVV PSFLPYHRME RKNALVDNGV KRPNLASNCA NEKGDSDITL HLGLPNDVHQ  240
KRKTPEKETI SNDSETQMAL V
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13790.17e-67MIKC_MADS family protein