PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIV99728

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

GRF

Protein Properties

Length: 392aa MW: 45043 Da PI: 9.4292

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIV99728	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	77.7	1.1e-24	77	120	1	44
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 d+epgrCrRtDGKkWRCs+++++++k+CErH+hrg++rsrk++e OIV99728 77 DPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVE 120 79***************************************987 PP
2	QLQ	54.8	2.8e-19	9	44	2	37
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 +FT++Q+q+L++Q+l+yKy+a++ +Pp+L++ i++ OIV99728 9 PFTPSQWQELEHQALIYKYIASGISIPPDLIFSIKR 44 8*******************************9985 PP

Sequence ? help Back to Top
Protein Sequence Length: 392 aa Download sequence
MMNRRNKFPF TPSQWQELEH QALIYKYIAS GISIPPDLIF SIKRSYLDSP ISSRLLPHHP 60 QHFRWNYLPM GLGRKIDPEP GRCRRTDGKK WRCSKEAYPD SKYCERHMHR GKNRSRKPVE 120 VLKTTNNTYA SSTSTTPSSI LSITKNNPAL APTTAQNIFH HHPHQHSSSS YGSHLQQHSF 180 LYHHPPPSRP SSTGLYFQDN NSASLFLDNA SCSQNNTDSR YVYGQKEEVD EHAFFNEPSG 240 NMRSFSASSI DDSWNLTPLS INSPSSSKQR NFSGLTNNDN EYSYLQLQSL SDNSKQQPKQ 300 DQGFYNDIKC EKFMKLGDKE EPPQQKTVHR FFDEWPPKSR GTWLDLDDKS STTQLSISIP 360 TSHDFGTFSS RNQRGNEKKL PIHFDIVLIS IP

Sequence ? help Back to Top

Protein Sequence Length: 392 aa Download sequence

MMNRRNKFPF TPSQWQELEH QALIYKYIAS GISIPPDLIF SIKRSYLDSP ISSRLLPHHP  60
QHFRWNYLPM GLGRKIDPEP GRCRRTDGKK WRCSKEAYPD SKYCERHMHR GKNRSRKPVE  120
VLKTTNNTYA SSTSTTPSSI LSITKNNPAL APTTAQNIFH HHPHQHSSSS YGSHLQQHSF  180
LYHHPPPSRP SSTGLYFQDN NSASLFLDNA SCSQNNTDSR YVYGQKEEVD EHAFFNEPSG  240
NMRSFSASSI DDSWNLTPLS INSPSSSKQR NFSGLTNNDN EYSYLQLQSL SDNSKQQPKQ  300
DQGFYNDIKC EKFMKLGDKE EPPQQKTVHR FFDEWPPKSR GTWLDLDDKS STTQLSISIP  360
TSHDFGTFSS RNQRGNEKKL PIHFDIVLIS IP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13960.1	8e-54	GRF family protein

Link Out ? help Back to Top
Ensembl	OIV99728