PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIV99801

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

C2H2

Protein Properties

Length: 164aa MW: 18547.5 Da PI: 8.2566

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIV99801	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14.4	0.00011	47	69	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C + F ++ L H++ H OIV99801 47 FSCNYCQRKFYSSQALGGHQNAH 69 89******************988 PP

Sequence ? help Back to Top
Protein Sequence Length: 164 aa Download sequence
MNFHHPNTSL HLREPDENNS LNLDLLLDPS SSSSSSPPIT SMEPRIFSCN YCQRKFYSSQ 60 ALGGHQNAHK LERTLAKKSR ELSSAMQAYG EGGQERRPYF RANSHQQHHL GRALGVMENQ 120 GTRVVAERRE FNYGSKDGVP SWSRGYTSEN VQEDVGQLDL SLRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G57520.1	9e-24	C2H2 family protein

Link Out ? help Back to Top
Ensembl	OIV99801