PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIV99990
Organism
Lupinus angustifolius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
Family M-type_MADS
Protein Properties Length: 374aa    MW: 42372.1 Da    PI: 7.437
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIV99990genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF72.53.5e-231053245
              ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSE CS
    SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgk 45
              + e++snrqvt+skR+ gilKKA+ELS+LCd+ +a+++fs+tgk
  OIV99990 10 KLESTSNRQVTYSKRKSGILKKAKELSILCDIPIALLMFSPTGK 53
              679***************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 374 aa     Download sequence    
MGRVKLKIKK LESTSNRQVT YSKRKSGILK KAKELSILCD IPIALLMFSP TGKPTLLQGE  60
RSNVEEVITK FAQLSPQERA KRKLESLEVL KKTFKKLDHD VKIQDFLGSS NQTMEELTHQ  120
VRVLQTQLAE VHQRLSYWSN LDKINNLEHL RQMEDSLRES MNRVCLQKEN LGKNQLLPLA  180
CSNQLQEGMN LPMMMAGLQE SQPLSWLLNN DNHHQLILPN EPKFLAFSDN TNRDAECSTD  240
ISLPGYSGYN IGNNKLEVGN SPQVTTLGHG GGALNELNGT ASLNVQHCEQ FAYPPHPPDD  300
EEMKQHQGMN SKPNTADYQI HNNFDLPRSL FENGHQFWNS GPGPCGIAMY NENGFHRVSK  360
LSSPYLFDLF HSHL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G18750.13e-99M-type_MADS family protein