PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW00002

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

TCP

Protein Properties

Length: 408aa MW: 43968.4 Da PI: 7.8968

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW00002	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	128.7	6e-40	79	184	3	89
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg.............. 88 +k+ +++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++tieWLlqqa+p+++++tgt++++a+++ + s +ss+s+ s + OIW00002 79 PKRASTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPSVIAATGTGTIPANFTsLNISLRSSGSTMSVPsqlrssyfnpnfsv 179 799*****************************************************************999888888888887777744433444444444 PP TCP 89 ....k 89 + OIW00002 180 qqqrR 184 44430 PP

Sequence ? help Back to Top
Protein Sequence Length: 408 aa Download sequence
MEEDDALHHH YQQHRQNFPF QLLEKKEDQE AASCSTSSPY PTLAISPTEP RTSNSNRSNQ 60 LDATTPTNAS IEPSKKPLPK RASTKDRHTK VDGRGRRIRM PALCAARVFQ LTRELGHKSD 120 GETIEWLLQQ AEPSVIAATG TGTIPANFTS LNISLRSSGS TMSVPSQLRS SYFNPNFSVQ 180 QQRRTLFPGI GLSSDNNNTS TLLNFQQPNN LAMLQAKQEL RDSVGGGGQS SSTTLDLSDT 240 NTVEGLGRKR RPTEQDLSST QHQMGGYLLQ SSAGAIPASH SHTPANIWMV AQAAAAANSN 300 NQVMSHGDPI WTFPQVNNSA ALYRGTVPSG LHFMNYPTPM TLLPGQQQVG LSGGGSSGNI 360 NMNEGHLSIF AGVSPYRPVT GVSESQASGS QSQHGGSDDR HDSTSHHS

Sequence ? help Back to Top

Protein Sequence Length: 408 aa Download sequence

MEEDDALHHH YQQHRQNFPF QLLEKKEDQE AASCSTSSPY PTLAISPTEP RTSNSNRSNQ  60
LDATTPTNAS IEPSKKPLPK RASTKDRHTK VDGRGRRIRM PALCAARVFQ LTRELGHKSD  120
GETIEWLLQQ AEPSVIAATG TGTIPANFTS LNISLRSSGS TMSVPSQLRS SYFNPNFSVQ  180
QQRRTLFPGI GLSSDNNNTS TLLNFQQPNN LAMLQAKQEL RDSVGGGGQS SSTTLDLSDT  240
NTVEGLGRKR RPTEQDLSST QHQMGGYLLQ SSAGAIPASH SHTPANIWMV AQAAAAANSN  300
NQVMSHGDPI WTFPQVNNSA ALYRGTVPSG LHFMNYPTPM TLLPGQQQVG LSGGGSSGNI  360
NMNEGHLSIF AGVSPYRPVT GVSESQASGS QSQHGGSDDR HDSTSHHS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G47620.1	1e-55	TCP family protein

Link Out ? help Back to Top
Ensembl	OIW00002