PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW00167

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

MYB

Protein Properties

Length: 331aa MW: 37801.1 Da PI: 6.3953

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW00167	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	50.9	3.6e-16	33	80	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT +Ed+ l ++++ +G g+W++ a g++Rt+k+c++rw++yl OIW00167 33 RGPWTVDEDLALTNYIANHGEGRWNSLAPLAGLKRTGKSCRLRWLNYL 80 89********************************************97 PP
2	Myb_DNA-binding	49.3	1.2e-15	88	129	3	46
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 + T eE++l++++++++G++ W++Ia++++ gRt++++k++w++ OIW00167 88 NITLEEQLLILELHNRWGNR-WSKIAQCLP-GRTDNEIKNYWRT 129 6699**************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 331 aa Download sequence
MTVVESMVVK GRDSSSSNNN NNIESKEDMD LRRGPWTVDE DLALTNYIAN HGEGRWNSLA 60 PLAGLKRTGK SCRLRWLNYL HPDVRLGNIT LEEQLLILEL HNRWGNRWSK IAQCLPGRTD 120 NEIKNYWRTR VQKHAKQLKC DMNSKQFKDT IRYLWMPRLV ERIQASAPTT FKMSSPTLCT 180 CTNVTTSNIY DNNLNNSEVH KGKMVLPQNG VMNDDFVGSH ITTSTSQSYT PENSSTGASS 240 DTFGTHEVSP ILDLSIDYYS VPVSSNNNPN PQDYFQPSQF NYSDCITSPS WFNFQAMEPN 300 SPWIQSGDTL NNFWNVDSNM FLQQQLMSDN M

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G49620.1	6e-82	MYB family protein

Link Out ? help Back to Top
Ensembl	OIW00167