PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW00261

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

SBP

Protein Properties

Length: 396aa MW: 43681.4 Da PI: 7.5817

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW00261	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	134	4.8e-42	99	176	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +C v+gC++dls++++yhrrhkvCe hsk+p+v++ g++qrfCqqCsrfh+l+efDe+krsCr+rL++hn+rrrk+q+ OIW00261 99 TCLVDGCNSDLSNCRDYHRRHKVCELHSKTPQVTIGGQKQRFCQQCSRFHSLEEFDEGKRSCRKRLDGHNRRRRKPQP 176 5**************************************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 396 aa Download sequence
MDWNLKSPSL DLTEVDQGST FPSMETMDEG SSRFGVYRAK GEFSVDLKLG QVGNFGAESM 60 LSKPKYAASD AGLSKMASTL ASGSSKRARA FNNGNHTVTC LVDGCNSDLS NCRDYHRRHK 120 VCELHSKTPQ VTIGGQKQRF CQQCSRFHSL EEFDEGKRSC RKRLDGHNRR RRKPQPEPLT 180 RSTSFLSNYQ GTQLLPFSGS QIYSSNTMMN PGWSGGVVTS SADVRLHSHH QQQMNFIEKQ 240 DLFLGSSPTS YKEGKQLAYL QGDHNPTVTL NNQNTHHLQT LLRTSPYSES SGGLRCKMFC 300 DDSLTSSVHD SPCALSLLSS PQTHNNSGNG LNQMVQPHSS SLMQPLGLSL HDNNSLESVD 360 PVLDPNGSDH CSSMYNIGSN GSQGSDVPQL FPFQWE

Sequence ? help Back to Top

Protein Sequence Length: 396 aa Download sequence

MDWNLKSPSL DLTEVDQGST FPSMETMDEG SSRFGVYRAK GEFSVDLKLG QVGNFGAESM  60
LSKPKYAASD AGLSKMASTL ASGSSKRARA FNNGNHTVTC LVDGCNSDLS NCRDYHRRHK  120
VCELHSKTPQ VTIGGQKQRF CQQCSRFHSL EEFDEGKRSC RKRLDGHNRR RRKPQPEPLT  180
RSTSFLSNYQ GTQLLPFSGS QIYSSNTMMN PGWSGGVVTS SADVRLHSHH QQQMNFIEKQ  240
DLFLGSSPTS YKEGKQLAYL QGDHNPTVTL NNQNTHHLQT LLRTSPYSES SGGLRCKMFC  300
DDSLTSSVHD SPCALSLLSS PQTHNNSGNG LNQMVQPHSS SLMQPLGLSL HDNNSLESVD  360
PVLDPNGSDH CSSMYNIGSN GSQGSDVPQL FPFQWE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	157	174	KRSCRKRLDGHNRRRRKP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G50670.1	7e-77	SBP family protein

Link Out ? help Back to Top
Ensembl	OIW00261