PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW00324

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

MYB

Protein Properties

Length: 460aa MW: 53265.6 Da PI: 6.6733

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW00324	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	59.1	1e-18	191	237	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT++Ed ll+++v+q+G + W+ Ia+ ++ gR +kqc++rw+++l OIW00324 191 KGQWTEDEDRLLIQLVEQYGVRKWAHIAQNLP-GRIGKQCRERWHNHL 237 799***************************.***********97 PP
2	Myb_DNA-binding	58	2.2e-18	244	285	2	45
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 WT eEd++l++a+++ G++ W+ Ia++++ gRt++++k++w+ OIW00324 244 EVWTDEEDKILIQAHAEIGNK-WAEIAKRLP-GRTENSIKNHWN 285 68*****************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 460 aa Download sequence
MDLETNQNEN YASQPMHLQE NYLKQPSKKE ELPFETPSSQ EFMQDFQHID QFHHTNASLP 60 NQVFGIQTQN FDPFVNITCG CSQSDFDGYE CKPFVENDGS GSHAHVVDIF QYEGYSLNFP 120 RRNQMDIMPS NQSYLPFNPL ETKSMNFAAP DEVSCISPAN YYRRVGLNRN NKTSPIIRRS 180 CKVKKKSNIV KGQWTEDEDR LLIQLVEQYG VRKWAHIAQN LPGRIGKQCR ERWHNHLRPD 240 IKKEVWTDEE DKILIQAHAE IGNKWAEIAK RLPGRTENSI KNHWNATKRR QYSKRKCRSK 300 YPRGTILQDY IKSLNLDKNP PIDYRKRSSA NAMRIKASTS KAATSTTQPH STNQVSSNDR 360 LVPNYEFNEV SDFCFDDNMF QEGCSIDSLL DDMPCAPTMD EKDFDGKMQS ASKMKGKQVV 420 NVEEGHHFET EMPQEMEGNV VKKELDLVEM MSQVNQTHDD

Sequence ? help Back to Top

Protein Sequence Length: 460 aa Download sequence

MDLETNQNEN YASQPMHLQE NYLKQPSKKE ELPFETPSSQ EFMQDFQHID QFHHTNASLP  60
NQVFGIQTQN FDPFVNITCG CSQSDFDGYE CKPFVENDGS GSHAHVVDIF QYEGYSLNFP  120
RRNQMDIMPS NQSYLPFNPL ETKSMNFAAP DEVSCISPAN YYRRVGLNRN NKTSPIIRRS  180
CKVKKKSNIV KGQWTEDEDR LLIQLVEQYG VRKWAHIAQN LPGRIGKQCR ERWHNHLRPD  240
IKKEVWTDEE DKILIQAHAE IGNKWAEIAK RLPGRTENSI KNHWNATKRR QYSKRKCRSK  300
YPRGTILQDY IKSLNLDKNP PIDYRKRSSA NAMRIKASTS KAATSTTQPH STNQVSSNDR  360
LVPNYEFNEV SDFCFDDNMF QEGCSIDSLL DDMPCAPTMD EKDFDGKMQS ASKMKGKQVV  420
NVEEGHHFET EMPQEMEGNV VKKELDLVEM MSQVNQTHDD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18770.1	1e-99	MYB family protein

Link Out ? help Back to Top
Ensembl	OIW00324