PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW00555

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

C2H2

Protein Properties

Length: 376aa MW: 42941.7 Da PI: 7.0199

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW00555	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.3	0.00051	79	101	3	23
ET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 3 Cp..dCgksFsrksnLkrHirtH 23 C+ Cgk+F + L++H H OIW00555 79 CSyeGCGKTFIDAGALRKHSHIH 101 77779**************7766 PP
2	zf-C2H2	16.5	2.5e-05	106	130	1	23
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 y+C+ Cgk F ++s LkrH H OIW00555 106 YVCHyeGCGKKFLDSSKLKRHFLIH 130 9********************8877 PP
3	zf-C2H2	21.7	5.4e-07	136	160	1	23
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 ++Cp Cgk Fs nL++H++tH OIW00555 136 FVCPheGCGKAFSLDFNLRSHMKTH 160 89**********************9 PP
4	zf-C2H2	17.1	1.5e-05	166	190	1	23
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 + Cp dCgk++ + + Lk+Hi +H OIW00555 166 HICPytDCGKRYAHEYKLKNHIASH 190 68*********************96 PP
5	zf-C2H2	13	0.00031	234	259	1	23
EEET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt.H 23 y Cp C k + + + Lk H+++ H OIW00555 234 YACPyeGCEKAYIHEYKLKLHLKReH 259 89*********************999 PP

Sequence ? help Back to Top
Protein Sequence Length: 376 aa Download sequence
MEIHYSQSYF ERRPIIKSKA PAVKWVKEWV PQDVVATGGK CLLLRWVTED TLKALKEKEK 60 EPSVPQTEPE PNTEVLFLCS YEGCGKTFID AGALRKHSHI HGERQYVCHY EGCGKKFLDS 120 SKLKRHFLIH TGERDFVCPH EGCGKAFSLD FNLRSHMKTH SQENYHICPY TDCGKRYAHE 180 YKLKNHIASH HGKNPSVDVT PVSHVTKYTP ASEKQTKNKH SGGAYGSTSS DRPYACPYEG 240 CEKAYIHEYK LKLHLKREHP EHNEHAQANA DNEIDDEASD QDAYSGGKRS NGKIQKQSKP 300 KPNLKLPPSK VAKRKGSSTP SIASLAARAK KPWPLKQETY DEEDSEETEE DRDNVEDGWR 360 YAGHNEEDDE ETEYED

Sequence ? help Back to Top

Protein Sequence Length: 376 aa Download sequence

MEIHYSQSYF ERRPIIKSKA PAVKWVKEWV PQDVVATGGK CLLLRWVTED TLKALKEKEK  60
EPSVPQTEPE PNTEVLFLCS YEGCGKTFID AGALRKHSHI HGERQYVCHY EGCGKKFLDS  120
SKLKRHFLIH TGERDFVCPH EGCGKAFSLD FNLRSHMKTH SQENYHICPY TDCGKRYAHE  180
YKLKNHIASH HGKNPSVDVT PVSHVTKYTP ASEKQTKNKH SGGAYGSTSS DRPYACPYEG  240
CEKAYIHEYK LKLHLKREHP EHNEHAQANA DNEIDDEASD QDAYSGGKRS NGKIQKQSKP  300
KPNLKLPPSK VAKRKGSSTP SIASLAARAK KPWPLKQETY DEEDSEETEE DRDNVEDGWR  360
YAGHNEEDDE ETEYED

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G06634.1	1e-140	C2H2 family protein

Link Out ? help Back to Top
Ensembl	OIW00555