PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW00610

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

SBP

Protein Properties

Length: 441aa MW: 48813.2 Da PI: 7.7778

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW00610	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	123.5	9.2e-39	170	246	1	77
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S-- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkq 77 +CqvegC dls+akeyh +h+vC+ hsk+p+vl+ g+ rfCqqCsrfh lsefDe+krsCrrrL++hn+rrrk++ OIW00610 170 RCQVEGCGLDLSSAKEYHCKHRVCDSHSKSPKVLIGGTVCRFCQQCSRFHGLSEFDEKKRSCRRRLSDHNARRRKPH 246 6**************************************************************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 441 aa Download sequence
MDWNAKSPSQ WDWEHQLLLN AKATEISKSL PPNWNGETNQ EINVGLLDIS VGSGCSGSEL 60 IHASSRSSIS ASINSTSNRD SKTSMYTFET SLDDSSGKRE LSKVEISHGL EHSSASGEPL 120 LSLKLGKRLY FEDVYPGSIS KSPSFSGAPM SSLSTGKKCK SNGQNVQFPR CQVEGCGLDL 180 SSAKEYHCKH RVCDSHSKSP KVLIGGTVCR FCQQCSRFHG LSEFDEKKRS CRRRLSDHNA 240 RRRKPHPVAT RLNQPSSPYD GRQHMSPLAH SRTATNLVWQ DTHSSKLPQT KDFLFNPAKA 300 NNEIPSIGTT VSYDFNPPFT LKGIATNSAH PGLEDSITSS DHNVTQDFHH ALSLLSTNSW 360 GGSHEHKLIS VEPPNNAIVT GQPVTHAMGQ CLPPEYWHIG QQPVNSSMWI SYSNCDDSNR 420 FQEFQLFREP YESGFPHNQL G

Sequence ? help Back to Top

Protein Sequence Length: 441 aa Download sequence

MDWNAKSPSQ WDWEHQLLLN AKATEISKSL PPNWNGETNQ EINVGLLDIS VGSGCSGSEL  60
IHASSRSSIS ASINSTSNRD SKTSMYTFET SLDDSSGKRE LSKVEISHGL EHSSASGEPL  120
LSLKLGKRLY FEDVYPGSIS KSPSFSGAPM SSLSTGKKCK SNGQNVQFPR CQVEGCGLDL  180
SSAKEYHCKH RVCDSHSKSP KVLIGGTVCR FCQQCSRFHG LSEFDEKKRS CRRRLSDHNA  240
RRRKPHPVAT RLNQPSSPYD GRQHMSPLAH SRTATNLVWQ DTHSSKLPQT KDFLFNPAKA  300
NNEIPSIGTT VSYDFNPPFT LKGIATNSAH PGLEDSITSS DHNVTQDFHH ALSLLSTNSW  360
GGSHEHKLIS VEPPNNAIVT GQPVTHAMGQ CLPPEYWHIG QQPVNSSMWI SYSNCDDSNR  420
FQEFQLFREP YESGFPHNQL G

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	227	244	KKRSCRRRLSDHNARRRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G27360.4	2e-63	SBP family protein

Link Out ? help Back to Top
Ensembl	OIW00610