PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW00722

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

C2H2

Protein Properties

Length: 434aa MW: 48721.9 Da PI: 8.7794

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW00722	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	18.6	5e-06	64	86	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C++C++ F r nL+ H r+H OIW00722 64 YVCEICNQGFQRDQNLQMHRRRH 86 9*********************9 PP
2	zf-C2H2	15.2	6e-05	141	163	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C +C+k + +s++k Hi+ + OIW00722 141 WVCDKCSKGYAVQSDYKAHIKIC 163 58******************987 PP
3	zf-C2H2	10.6	0.0017	171	189	5	23
TTTEEESSHHHHHHHHHHT CS zf-C2H2 5 dCgksFsrksnLkrHirtH 23 dCg++Fsr +++ H+ ++ OIW00722 171 DCGRVFSRVESFIEHQDSC 189 9**************9887 PP

Sequence ? help Back to Top
Protein Sequence Length: 434 aa Download sequence
MLDKNNNNNN NTVFSGAPSS SDAPFTLSEN GVSNKRKRRP AGTPDPDAEV VSLSPKTLLE 60 SDRYVCEICN QGFQRDQNLQ MHRRRHKVPW KLLKRETQGL KKKVFVCPEP SCLHHDPCHA 120 LGDLVGIKKH FRRKHSNHKQ WVCDKCSKGY AVQSDYKAHI KICGTRGHSC DCGRVFSRVE 180 SFIEHQDSCT IRQHRPELQA LQPACSSRTA SSTSPSSEAN YSIAPTKLQG LRLPKSVEKV 240 DALLTSEIHN KPSTLDQMHN LELQLLPSST NSQERRNSSD VNYETHLKLS IGSCSTNDKG 300 SESNQLPSSQ THKNVNEITT MEVARLKEFA NEELKLAMVE KAYAEEARRE AKRLIEIAEL 360 EFENAQRIRK QAQSELGKAE ALRNQASKKM NSTVMEITCQ ACKQKFQTST IHGVPSEETS 420 IVMNSYMSSA TTEG

Sequence ? help Back to Top

Protein Sequence Length: 434 aa Download sequence

MLDKNNNNNN NTVFSGAPSS SDAPFTLSEN GVSNKRKRRP AGTPDPDAEV VSLSPKTLLE  60
SDRYVCEICN QGFQRDQNLQ MHRRRHKVPW KLLKRETQGL KKKVFVCPEP SCLHHDPCHA  120
LGDLVGIKKH FRRKHSNHKQ WVCDKCSKGY AVQSDYKAHI KICGTRGHSC DCGRVFSRVE  180
SFIEHQDSCT IRQHRPELQA LQPACSSRTA SSTSPSSEAN YSIAPTKLQG LRLPKSVEKV  240
DALLTSEIHN KPSTLDQMHN LELQLLPSST NSQERRNSSD VNYETHLKLS IGSCSTNDKG  300
SESNQLPSSQ THKNVNEITT MEVARLKEFA NEELKLAMVE KAYAEEARRE AKRLIEIAEL  360
EFENAQRIRK QAQSELGKAE ALRNQASKKM NSTVMEITCQ ACKQKFQTST IHGVPSEETS  420
IVMNSYMSSA TTEG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	35	40	KRKRRP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68130.1	1e-135	C2H2 family protein

Link Out ? help Back to Top
Ensembl	OIW00722