PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW00979

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

Trihelix

Protein Properties

Length: 314aa MW: 35164.7 Da PI: 9.6439

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW00979	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	58.7	1.5e-18	32	122	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm....rergferspkqCkekwenlnkrykkikegekkr.tsessstcpyfdqle 86 +W+ +e+ Li+ +r+++ +l+r++lk+++W+ev++++ ++++qC++k+e+l+kry+ + +++++ ++ s + +f+ ++ OIW00979 32 CWSPEETSSLIDSYRQKWYSLGRSNLKATHWQEVADAVtascPNVSPPKTAVQCRHKMEKLRKRYRTEIQRARNLpVKKFNSAWLHFNLMD 122 7***********************************6655666667889******************9977999999**9997 PP

Sequence ? help Back to Top
Protein Sequence Length: 314 aa Download sequence
MASSSSPTDP SPPFAVPLLP PPPSSRRLPP PCWSPEETSS LIDSYRQKWY SLGRSNLKAT 60 HWQEVADAVT ASCPNVSPPK TAVQCRHKME KLRKRYRTEI QRARNLPVKK FNSAWLHFNL 120 MDSMEKGPSP AKSDFVKVDD DDDEDDDEDH DLIHANSLYK LRRNGIGSSG GGGGGGGGDG 180 WRGEGAFRIR IPSGVSVAKP DSRFYPKFSD EKRNPNYGFG GKGVKEGSGL GKREREKDPV 240 EEMVNAVKVL AEGFMRTEQM KMEMAREIER MRMEREMKRT KMILESQHRI VEAFANAVAE 300 QKKKTNQVPS SPES

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G44730.1	4e-51	Trihelix family protein

Link Out ? help Back to Top
Ensembl	OIW00979