PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW01085

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

SBP

Protein Properties

Length: 204aa MW: 22319.8 Da PI: 8.5061

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW01085	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	71.4	1.7e-22	157	204	1	48
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSS CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsr 48 +Cqve+C++ l +ak+yhrrhkvCe+hskap+v+v gleqrfCqqCsr OIW01085 157 RCQVEECHVALLNAKDYHRRHKVCEMHSKAPKVMVLGLEQRFCQQCSR 204 6**********************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 204 aa Download sequence
MDLRGNMFCL GKRDQNGNNN SNSYGWDSFE ITTSTSSNLI NAFNTTAEEN SAVNSHEAGL 60 ANALMFLPQP HYNNNNNSNG RVNHNHHHHR HQPQLYGGDG LHVDPHLMCL KLGKRHYFED 120 TSGAASTVGV LASADKRGKG GGGGGGGGLK TASSLPRCQV EECHVALLNA KDYHRRHKVC 180 EMHSKAPKVM VLGLEQRFCQ QCSR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G43270.1	8e-23	SBP family protein

Link Out ? help Back to Top
Ensembl	OIW01085