PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW01091

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

C2H2

Protein Properties

Length: 394aa MW: 45192.2 Da PI: 6.4454

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW01091	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.9	0.0007	5	27	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC+ C +sFs+ L H+r+H OIW01091 5 HKCKLCLRSFSNGRALGGHMRSH 27 79********************9 PP
2	zf-C2H2	13.4	0.00022	248	270	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ykC+ C+k+F++ L H +H OIW01091 248 YKCETCNKVFRSYQALGGHRASH 270 9***********99999998887 PP

Sequence ? help Back to Top
Protein Sequence Length: 394 aa Download sequence
MMEKHKCKLC LRSFSNGRAL GGHMRSHMMN YPLPTKPQAS SSRTIQLSFE ADSASSSSSE 60 ENSDNNNNNN IVNNNDDKGV ICYGLRENPK RSFRLEDPEF SSMILQDRES ETESYKNRKW 120 YETSNYRSRM RDDCNNDEGE AMMKKIKLLN KGSKIESWVV DHEPLMSSVS DVSTEEDVAF 180 CLMMMSRDNR WKRQKDQEQE QLMKNDRYYD YDKEEDEMER FSDEQFESDA SSEEESRFSK 240 NKVRGGRYKC ETCNKVFRSY QALGGHRASH KRMKVKISRV NNEEQELENE NGGSFALMVV 300 EKKIHEPVFQ PKTGSRQCPI CLRVFGSGQA LGGHKRTHVI GSTTIIKSTQ VSISTKHGNN 360 FIDLNLPAQG DNGDDDINPI ENSAVSDADF VKIH

Sequence ? help Back to Top

Protein Sequence Length: 394 aa Download sequence

MMEKHKCKLC LRSFSNGRAL GGHMRSHMMN YPLPTKPQAS SSRTIQLSFE ADSASSSSSE  60
ENSDNNNNNN IVNNNDDKGV ICYGLRENPK RSFRLEDPEF SSMILQDRES ETESYKNRKW  120
YETSNYRSRM RDDCNNDEGE AMMKKIKLLN KGSKIESWVV DHEPLMSSVS DVSTEEDVAF  180
CLMMMSRDNR WKRQKDQEQE QLMKNDRYYD YDKEEDEMER FSDEQFESDA SSEEESRFSK  240
NKVRGGRYKC ETCNKVFRSY QALGGHRASH KRMKVKISRV NNEEQELENE NGGSFALMVV  300
EKKIHEPVFQ PKTGSRQCPI CLRVFGSGQA LGGHKRTHVI GSTTIIKSTQ VSISTKHGNN  360
FIDLNLPAQG DNGDDDINPI ENSAVSDADF VKIH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G60580.1	8e-44	C2H2 family protein

Link Out ? help Back to Top
Ensembl	OIW01091