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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | OIW01164 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
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| Family | HD-ZIP | ||||||||
| Protein Properties | Length: 256aa MW: 28220.8 Da PI: 7.9664 | ||||||||
| Description | HD-ZIP family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
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| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | Homeobox | 59.1 | 7.3e-19 | 103 | 157 | 2 | 56 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
rk+ ++tkeq +Lee F+++++++ ++++ LA++l+L rqV vWFqNrRa+ k
OIW01164 103 RKKLRLTKEQAYVLEETFKEHNTLNPKQKQTLAMELSLRPRQVEVWFQNRRARNK 157
788899***********************************************98 PP
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| 2 | HD-ZIP_I/II | 118.4 | 4e-38 | 103 | 192 | 1 | 91 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91
+kk+rl+keq+ +LEe+F+e+++L+p++K++la eL l+prqv+vWFqnrRAR k+kq+E+d+e+Lkr+ ++l+een+rL+kev+eLr +l
OIW01164 103 RKKLRLTKEQAYVLEETFKEHNTLNPKQKQTLAMELSLRPRQVEVWFQNRRARNKLKQTEVDCESLKRCSKNLTEENKRLQKEVQELR-AL 192
69*************************************************************************************9.55 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 256 aa Download sequence |
MDEKNDVLGL SLRLSFGACG MVNLPPSISK VNHNMHKHLH DLSKIPVATD CVNDNGVSSP 60 NSTLSSLSVC KQSERDDNEA VVRASCSQGS DDEDGGGDGD GTRKKLRLTK EQAYVLEETF 120 KEHNTLNPKQ KQTLAMELSL RPRQVEVWFQ NRRARNKLKQ TEVDCESLKR CSKNLTEENK 180 RLQKEVQELR ALKLSPHLYM HMNPPTTLTM CPSCERVAIS SASSSSSTTS QSIVASSNHN 240 PLDLTLRLGA GGACQT |
| Nucleic Localization Signal ? help Back to Top | |||
|---|---|---|---|
| No. | Start | End | Sequence |
| 1 | 102 | 108 | TRKKLRL |
| 2 | 152 | 160 | RRARNKLKQ |
| 3 | 166 | 171 | ESLKRC |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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| Hit ID | E-value | Description | ||||
| AT3G60390.1 | 4e-67 | HD-ZIP family protein | ||||
| Link Out ? help Back to Top | |
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| Ensembl | OIW01164 |
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for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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