PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW01235

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

C2H2

Protein Properties

Length: 283aa MW: 32045.6 Da PI: 7.2639

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW01235	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13.6	0.0002	59	81	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C + F++ L H+++H OIW01235 59 YSCSFCRREFRSAQALGGHMNVH 81 99*******************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 283 aa Download sequence
MDEQGQYRVS TKRKYSMSSS NLTSSETNYP SSYDESSWEE KAFAKDASGF GCIWPPRSYS 60 CSFCRREFRS AQALGGHMNV HRRDRARLNQ HQPTSPQLNE TLNIVQNPLN SGYLYPSSLC 120 GLANTNNNTN PNYSDPHHVI ASSSMVLTPS VNKDFIEETH NIPIYSSSIF HKSSNLSSKS 180 FSNLAESGAE RISKGLKNDH KTDVAVSMNL NLYVCRAYTP VQFETEEEDL ISFKKRKMDA 240 SIPFFPKQSS VDTNHMQSQM FEFSPSSIEE VDLELRLGYR PKV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G37740.1	1e-26	C2H2 family protein

Link Out ? help Back to Top
Ensembl	OIW01235