PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW01441

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

C2H2

Protein Properties

Length: 517aa MW: 57615.6 Da PI: 6.1608

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW01441	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	21	8.6e-07	280	301	2	23
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 C++Cgk F+r nL+ H+r H OIW01441 280 FCTICGKGFKRDANLRMHMRGH 301 6*******************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 517 aa Download sequence
MDLQRNLCAN TWARSCSLPS PGNGLQTNIS SNPPPFPDFG LQHNLDKWDD PSLSDYGVGG 60 ETSFKEFNQS SQTQCPLSYD SNNQIKNPNQ ESRLLSDSSQ TIKLPDWDPS VMLNNLSFLE 120 DKIHHLQDLV RLIVSQTGQP FGQPNELVTQ EQQLVTADLT SVIVQLISTA GTLLPSVRYT 180 LSNSSPLVGQ LSQPRELIAP SASGLSSRSI QPQNNNVSKL PDHSMLNDPP NNCKMEQNCN 240 MEEHELKDEE DGEDGENLLP GSYEILQLEK EEILAPHTHF CTICGKGFKR DANLRMHMRG 300 HGDEYKTPEA LAKPHKEPGS KPQLIKRYSC PYGGCKRNKD HKKFQPLKTI LCVKNHYKRT 360 HCDRSYICSR CNTKKFSVMA DLKTHEKHCG KDKWLCSCGT TFSRKDKLFG HIALFQGHTP 420 AIPLDDIKVP AVAPDQDCKE SSMVGSMDFT YGSNPSSVNG VQNAMDVKCN IDDPINYFSP 480 LNFETNFDVF NDSETSFSFL MSGAFKSAGD SSSDNIL

Sequence ? help Back to Top

Protein Sequence Length: 517 aa Download sequence

MDLQRNLCAN TWARSCSLPS PGNGLQTNIS SNPPPFPDFG LQHNLDKWDD PSLSDYGVGG  60
ETSFKEFNQS SQTQCPLSYD SNNQIKNPNQ ESRLLSDSSQ TIKLPDWDPS VMLNNLSFLE  120
DKIHHLQDLV RLIVSQTGQP FGQPNELVTQ EQQLVTADLT SVIVQLISTA GTLLPSVRYT  180
LSNSSPLVGQ LSQPRELIAP SASGLSSRSI QPQNNNVSKL PDHSMLNDPP NNCKMEQNCN  240
MEEHELKDEE DGEDGENLLP GSYEILQLEK EEILAPHTHF CTICGKGFKR DANLRMHMRG  300
HGDEYKTPEA LAKPHKEPGS KPQLIKRYSC PYGGCKRNKD HKKFQPLKTI LCVKNHYKRT  360
HCDRSYICSR CNTKKFSVMA DLKTHEKHCG KDKWLCSCGT TFSRKDKLFG HIALFQGHTP  420
AIPLDDIKVP AVAPDQDCKE SSMVGSMDFT YGSNPSSVNG VQNAMDVKCN IDDPINYFSP  480
LNFETNFDVF NDSETSFSFL MSGAFKSAGD SSSDNIL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G34370.2	1e-156	C2H2 family protein

Link Out ? help Back to Top
Ensembl	OIW01441