PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIW01518
Organism
Lupinus angustifolius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
Family LBD
Protein Properties Length: 201aa    MW: 22340.5 Da    PI: 6.3316
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIW01518genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260139.61.1e-43481471100
    DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallkee 100
               +CaaCk+lrr+C++ Cvlapyfp ++p kf ++h++FGasn++k+l++lpe++reda+ss+vyeA+ar+rdP+yG++g i++lq+q+++l+a+la++++e
  OIW01518  48 PCAACKILRRRCVERCVLAPYFPPNDPIKFTIAHRVFGASNIIKFLQELPESQREDAVSSMVYEANARIRDPIYGCAGAISQLQNQINELQAQLAKAQAE 147
               7***********************************************************************************************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 201 aa     Download sequence    
MFSNSHPLSN SSPLCSQSPQ PFSSRSQSPP SATPPPQSPP PPPVVVSPCA ACKILRRRCV  60
ERCVLAPYFP PNDPIKFTIA HRVFGASNII KFLQELPESQ REDAVSSMVY EANARIRDPI  120
YGCAGAISQL QNQINELQAQ LAKAQAEIIN MHFQHSNLVA LICMEMSESQ EKQLFQSQQH  180
IDMSCFLDDN SLGCSWEPLW T
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07900.12e-65LBD family protein