PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW01527

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

C2H2

Protein Properties

Length: 293aa MW: 33182.7 Da PI: 6.7034

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW01527	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11	0.0013	114	133	1	20
EEETTTTEEESSHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHi 20 ++C C+k+F+r n++ H+ OIW01527 114 FSCIVCNKTFNRFNNMQMHM 133 67889**************9 PP
2	zf-C2H2	16	3.4e-05	199	221	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C +Cgk+F + + ++H +++ OIW01527 199 FECRKCGKPFAVRGDWRTHEKNC 221 89*****************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 293 aa Download sequence
MQTHSFSYIS SCGSENADIV DDEESISLSL GLPGQKHNPK VSNQNHSFHH LQNPTNSYDQ 60 SGVTVALHIG LPNTDNSPNT TSIATQPHNL SETPIQGQYW IPTPEQILVG PTQFSCIVCN 120 KTFNRFNNMQ MHMWGHGSQY RTGAESLRGS KPASSMLRLP CYCCAEGCKN NREYPRSKPL 180 KDFRTLQTHY KRKHGEKPFE CRKCGKPFAV RGDWRTHEKN CGKLWFCICG SDFKHKRSLK 240 DHVRAFGDGH APHTVASQSC DYLGGERYED ENEEEEECDD EYDNSEDVAV TFN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G13290.1	1e-119	C2H2 family protein

Link Out ? help Back to Top
Ensembl	OIW01527