PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW01668

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

bHLH

Protein Properties

Length: 548aa MW: 60454.4 Da PI: 5.3459

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW01668	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	49.2	9.3e-16	310	356	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn ErrRRdriN+++ L+el+P + K +Ka++L +A+eY+ksLq OIW01668 310 VHNLSERRRRDRINEKMRALQELIPRC-----NKSDKASMLDEAIEYLKSLQ 356 6***********************8.....6****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 548 aa Download sequence
MNHCVPDFDI QMDDEEDYQI SHPNKPSMQN DEIMELLWQN GQVVMQRQNQ RQIRKLTPAA 60 AAESTGDVIA EGSSSAREIR SSDGEENFHS QNLFMQEDEM ASWLHYSIHD EDPAPLDHHN 120 FCTGILYASP NQNGAVDTVV NMAEIQQPPV TVASRPPIPP PRIQNFSHFS KHNMTRVEPA 180 LISKAADARE STVVDSCDTV AAGSRMSENV RSSAEHAETG RGSMIAAGKA PATSGGGETG 240 TCDMTVTSSQ GGSSGSAEPG QREPALDRKR KGRELEESDF QSEDVDFESP EAKKQVRGST 300 STKKSRAAEV HNLSERRRRD RINEKMRALQ ELIPRCNKSD KASMLDEAIE YLKSLQLQVQ 360 MMSMGCGMVP MMFPGIQQYM PPMGMGIGMG MGMEMGMNRP VMPFPNMLVN SALPSANAAA 420 HLGPRFPMPP FHMPHVPAPE SSRMQAPNQS DNMLPSVGSA PDSDQSRIPN FGDPYQQYLQ 480 LQLMQKKDDH RYYNQALTIQ MVMLTIVSPV PVTLISAFQV FEVILNKTRM TILNSGLVCI 540 AGLNQGIM

Sequence ? help Back to Top

Protein Sequence Length: 548 aa Download sequence

MNHCVPDFDI QMDDEEDYQI SHPNKPSMQN DEIMELLWQN GQVVMQRQNQ RQIRKLTPAA  60
AAESTGDVIA EGSSSAREIR SSDGEENFHS QNLFMQEDEM ASWLHYSIHD EDPAPLDHHN  120
FCTGILYASP NQNGAVDTVV NMAEIQQPPV TVASRPPIPP PRIQNFSHFS KHNMTRVEPA  180
LISKAADARE STVVDSCDTV AAGSRMSENV RSSAEHAETG RGSMIAAGKA PATSGGGETG  240
TCDMTVTSSQ GGSSGSAEPG QREPALDRKR KGRELEESDF QSEDVDFESP EAKKQVRGST  300
STKKSRAAEV HNLSERRRRD RINEKMRALQ ELIPRCNKSD KASMLDEAIE YLKSLQLQVQ  360
MMSMGCGMVP MMFPGIQQYM PPMGMGIGMG MGMEMGMNRP VMPFPNMLVN SALPSANAAA  420
HLGPRFPMPP FHMPHVPAPE SSRMQAPNQS DNMLPSVGSA PDSDQSRIPN FGDPYQQYLQ  480
LQLMQKKDDH RYYNQALTIQ MVMLTIVSPV PVTLISAFQV FEVILNKTRM TILNSGLVCI  540
AGLNQGIM

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	315	320	ERRRRD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G20180.2	9e-64	bHLH family protein

Link Out ? help Back to Top
Ensembl	OIW01668