PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW01800

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

C2H2

Protein Properties

Length: 187aa MW: 21181.1 Da PI: 5.2633

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW01800	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14	0.00015	33	55	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C++ F++ L H++ H OIW01800 33 YECTFCKRGFTNAQALGGHMNIH 55 99*******************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 187 aa Download sequence
MNSEKLVSNE ISSEESDHQE EAQDDTEGAK RSYECTFCKR GFTNAQALGG HMNIHRKDRA 60 KAKKVTNQTN EEYSMAPPFA SGFSNQTTMH YSILESQSNC NINFHPPPAP NLFRDQPPYA 120 PNTQLQYDQC HNLGSRPMNL NQLELRGANL SLQIGPSHVD NNTNQVRRGT QEDDEVDLEL 180 RLGHDQY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G43540.1	1e-16	C2H2 family protein

Link Out ? help Back to Top
Ensembl	OIW01800