PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW01857

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

C2H2

Protein Properties

Length: 545aa MW: 60234.5 Da PI: 8.3818

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW01857	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16.3	2.8e-05	49	71	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C+ C+k F r nL+ H r H OIW01857 49 FICEVCNKGFQREQNLQLHRRGH 71 89*******************88 PP
2	zf-C2H2	12.6	0.00041	125	147	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC++C+k + +s+ k H +t+ OIW01857 125 WKCEKCSKKYAVQSDWKAHSKTC 147 58*****************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 545 aa Download sequence
MEAASSSTPF LGIRQENQSQ ITQHQPSTAD PDAEVIALSP KTLMATNRFI CEVCNKGFQR 60 EQNLQLHRRG HNLPWKLKQK TTKEPKRKVY LCPEPTCVHH DPSRALGDLT GIKKHYSRKH 120 GEKKWKCEKC SKKYAVQSDW KAHSKTCGTR EYRCDCGTLF SRRDSFITHR AFCDALSHET 180 ARHPSNLNPL GTHLYGTTNH MSLTLSQVGA QISHLQNQNQ ETSNSILSLG NASLAAPKFE 240 HMLSPLHHQQ QSSYGVFQSP HSMPNNSSAG FFMNDPNQGF HQELQSHHQQ GTISSHKQLY 300 SLMQLPNLQG NTNNNNTTSA PTNMFNPSFF PNSNNSSGSI ISDQFNNQGT TLYTNDSPSN 360 HHFGSGSLSS LFGNSSLQQE TMSPHMSATA LLQKAAQMGS TTTNTNASTM LRGLGSSSNN 420 GVESFGSDSR EEGIRSSMEN DQHHHIHGFM NSLANGNNSI YGNMKGNESN LSQFHNVEEP 480 NKLSQNLGVC FGGSDKLTLD FLGVGGMVRN MSGRFSQREQ QHSLDSMSSL DPKMENQSFG 540 SSAPQ

Sequence ? help Back to Top

Protein Sequence Length: 545 aa Download sequence

MEAASSSTPF LGIRQENQSQ ITQHQPSTAD PDAEVIALSP KTLMATNRFI CEVCNKGFQR  60
EQNLQLHRRG HNLPWKLKQK TTKEPKRKVY LCPEPTCVHH DPSRALGDLT GIKKHYSRKH  120
GEKKWKCEKC SKKYAVQSDW KAHSKTCGTR EYRCDCGTLF SRRDSFITHR AFCDALSHET  180
ARHPSNLNPL GTHLYGTTNH MSLTLSQVGA QISHLQNQNQ ETSNSILSLG NASLAAPKFE  240
HMLSPLHHQQ QSSYGVFQSP HSMPNNSSAG FFMNDPNQGF HQELQSHHQQ GTISSHKQLY  300
SLMQLPNLQG NTNNNNTTSA PTNMFNPSFF PNSNNSSGSI ISDQFNNQGT TLYTNDSPSN  360
HHFGSGSLSS LFGNSSLQQE TMSPHMSATA LLQKAAQMGS TTTNTNASTM LRGLGSSSNN  420
GVESFGSDSR EEGIRSSMEN DQHHHIHGFM NSLANGNNSI YGNMKGNESN LSQFHNVEEP  480
NKLSQNLGVC FGGSDKLTLD FLGVGGMVRN MSGRFSQREQ QHSLDSMSSL DPKMENQSFG  540
SSAPQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02070.1	1e-100	C2H2 family protein

Link Out ? help Back to Top
Ensembl	OIW01857