PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW01882

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

TCP

Protein Properties

Length: 256aa MW: 27346.4 Da PI: 9.2322

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW01882	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	128.1	8.9e-40	32	133	2	104
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssgkaaksaakskksqk 102 a+kk +++++h+kv+gR+RR+R+++ caar+F+L++eLG+++d++tieWLl+qa+p+i+++tgt++++as++ ++s s+ ++ +s++ +++s+ +s ++q+ OIW01882 32 AVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFS-SVSVSVRGGGNSNSLSSPSSSTSASQQH 131 78*******************************************************************777.4444444444444444444444455555 PP TCP 103 sa 104 ++ OIW01882 132 KT 133 44 PP

Sequence ? help Back to Top
Protein Sequence Length: 256 aa Download sequence
MSNSDGTTNA VINDTIIDSP QPHPPHRDGA LAVKKPPSKD RHSKVDGRGR RIRMPIICAA 60 RVFQLTRELG HKSDGQTIEW LLRQAEPSII AATGTGTTPA SFSSVSVSVR GGGNSNSLSS 120 PSSSTSASQQ HKTFLAPTPF ILGKKIRTDE EDPTKDNNGV SVGSLVGPNM PAGLWAFPAR 180 PEFGQVWSFA AATPELMSQQ HSSFLIQHQQ QHQQQQLAMG EASAARLGNY LPGHLNLLAS 240 LSGGHNNSGM RDDESN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G23280.1	5e-64	TCP family protein

Link Out ? help Back to Top
Ensembl	OIW01882