PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW01905

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

C2H2

Protein Properties

Length: 233aa MW: 26281.8 Da PI: 8.9503

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW01905	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12	0.00063	89	111	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C + F ++ L H++ H OIW01905 89 FSCNYCWRKFFSSQALGGHQNAH 111 89*****************9988 PP

Sequence ? help Back to Top
Protein Sequence Length: 233 aa Download sequence
MMTPNLNLKP ENNSEFSSQV DSIISLQETF YDLTKDTTLR TFTKANPDSG TITLDLTLNF 60 NPNEKLKGAT DTSSEEGVEA SASAIPRVFS CNYCWRKFFS SQALGGHQNA HKRERIMAKR 120 AMRMGMFTER YTSLASLPVH GSVCRSPSIE AHSTLHKKHM QSVRSPDMRV AAKFQKDCFG 180 RLIIMEDNNV GLFWPGSFRQ IDQREHVQNS KTSFVEMVPH AQTSTAPDLT LRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G66140.1	7e-34	C2H2 family protein

Link Out ? help Back to Top
Ensembl	OIW01905