PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW02076

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

TCP

Protein Properties

Length: 299aa MW: 31918.4 Da PI: 10.2097

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW02076	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	120.9	1.5e-37	34	138	2	101
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg....kaaksaaks 97 + k+++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++ti WLl+ a+pai+++tgt++ +a ++ +++ + + ++ss+ + ++ ++++ OIW02076 34 TQKRSSTKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGETIRWLLEHAEPAIIAATGTGTVPAIAMsVNGTLKIPTTTHSSAiassDPEPGDPQE 134 6799************************************************************8888855542222222222222222221111222222 PP TCP 98 kksq 101 kk++ OIW02076 135 KKKR 138 2222 PP

Sequence ? help Back to Top
Protein Sequence Length: 299 aa Download sequence
MGPKEEPETE AAIRVMPTEM PMQVNKALVQ VQPTQKRSST KDRHTKVEGR GRRIRMPATC 60 AARIFQLTRE LGHKSDGETI RWLLEHAEPA IIAATGTGTV PAIAMSVNGT LKIPTTTHSS 120 AIASSDPEPG DPQEKKKRKR PANSAYVDIN DGVVSVSAGL TTSSHANTAI PLQNAIPLPQ 180 GMVPVWAIPS NAVVPAAGAF FVVPSPMAAG PSNQPQFFTL ARPISAFVSS MVPTPVQLQQ 240 HPTSTNTCSA SPSSKSPPIA TAMAPTTTAT TTTQMLRDFS LEIYDKQELQ FMSRSSSKQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	134	141	EKKKRKRP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45680.1	2e-74	TCP family protein

Link Out ? help Back to Top
Ensembl	OIW02076