PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW02172

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

C2H2

Protein Properties

Length: 499aa MW: 55999.4 Da PI: 9.5174

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW02172	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13	0.0003	443	465	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++Cp+C++ Fs+ L H r+H OIW02172 443 HQCPICNRIFSSGQALGGHKRSH 465 79******************999 PP

Sequence ? help Back to Top
Protein Sequence Length: 499 aa Download sequence
MEEKKFVCKY CSKRFPCGKS LGGHIRTHMN EHSAQANKER SNAAMLKFEA MRKKKRDSLG 60 YGDGDGDAGN PTYGLRENPK KTMRFVHSNT NKNVQQQLGK FCKECGKGFS SLKALCGHMA 120 CHSEKEKQKL VMDSQSDTET NSAPRRSKRM RFNNIISSSN NNNNNNYLSY SMANGSSSVS 180 EVEQEQEEVA RCLMMLSKDS SYHHSGRFAL FAESSDNNSV ILEAKSPSLE TKFTIKNGKK 240 SVSNAYEFAE RRLRNDSKLK SSEFGYHSDN SDSGYFRYGP KKVDSADSND GVFRSEVKSS 300 KVRDMAGFDD CDVELSKVLS RGRSRNTEFK KLVLEDLDNV REHGDTKRFA SKKSLIYDSL 360 GSKKVANDFN DEIYKRNGWK YESLNTERDN GYEDDSAYES DENSSDSDSY PAAKPHNNKN 420 LNGKKLSKGK KKLKLKSKKS KEHQCPICNR IFSSGQALGG HKRSHFVGGS EENTLVIRPA 480 SATPVPCLID LNLPAPVDE

Sequence ? help Back to Top

Protein Sequence Length: 499 aa Download sequence

MEEKKFVCKY CSKRFPCGKS LGGHIRTHMN EHSAQANKER SNAAMLKFEA MRKKKRDSLG  60
YGDGDGDAGN PTYGLRENPK KTMRFVHSNT NKNVQQQLGK FCKECGKGFS SLKALCGHMA  120
CHSEKEKQKL VMDSQSDTET NSAPRRSKRM RFNNIISSSN NNNNNNYLSY SMANGSSSVS  180
EVEQEQEEVA RCLMMLSKDS SYHHSGRFAL FAESSDNNSV ILEAKSPSLE TKFTIKNGKK  240
SVSNAYEFAE RRLRNDSKLK SSEFGYHSDN SDSGYFRYGP KKVDSADSND GVFRSEVKSS  300
KVRDMAGFDD CDVELSKVLS RGRSRNTEFK KLVLEDLDNV REHGDTKRFA SKKSLIYDSL  360
GSKKVANDFN DEIYKRNGWK YESLNTERDN GYEDDSAYES DENSSDSDSY PAAKPHNNKN  420
LNGKKLSKGK KKLKLKSKKS KEHQCPICNR IFSSGQALGG HKRSHFVGGS EENTLVIRPA  480
SATPVPCLID LNLPAPVDE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G26610.1	3e-88	C2H2 family protein

Link Out ? help Back to Top
Ensembl	OIW02172