PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIW02253
Organism
Lupinus angustifolius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus
Family RAV
Protein Properties Length: 341aa    MW: 37536.1 Da    PI: 7.2378
Description RAV family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIW02253genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP241.72.9e-1367115155
       AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
               s+ykGV   + +grW A+I++      ++r++lg+f t++eAaka++ a++ ++g
  OIW02253  67 SKYKGVVPQP-NGRWGAQIYEK-----HQRVWLGSFNTEDEAAKAYDTAAQLFRG 115
               89****9888.8*********3.....5**********99**********98887 PP
2B335.71.5e-11206262149
               EEEE-..-HHHHTT-EE--HHH.HTT........---..--SEEEEEETTS-EEEEE CS
        B3   1 ffkvltpsdvlksgrlvlpkkfaeeh........ggkkeesktltledesgrsWevk 49 
               f+k+ tpsdv+k++rlv+pk++ae+h        g+ +e+++ l +ed sg++W+ +
  OIW02253 206 FEKTVTPSDVGKLNRLVIPKHHAEKHfplqngvnGIATEKGVLLNFEDGSGKEWRST 262
               99*******************************999999***************975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 341 aa     Download sequence    
MEESTTSDSL SITRSPTTRL LPFTITSNKM SLSPSNHLCC VGSNVNATIE SEDGSGTEEE  60
SRKLPSSKYK GVVPQPNGRW GAQIYEKHQR VWLGSFNTED EAAKAYDTAA QLFRGKDAIK  120
NFKLLGGAAV EDGGNDDIET EFLNSHSKSE IIDMLRKHTY NDELEKSKRS RGINEQCLSR  180
GNAATNGGGV VYLSSACGNK AREKLFEKTV TPSDVGKLNR LVIPKHHAEK HFPLQNGVNG  240
IATEKGVLLN FEDGSGKEWR STELDKRMYI DCKDNEVGFV EPVQMVRLFG VNILKLHGSD  300
ANGDNDDNNA TTIGGWCHGK RRKMEVITLE CTKKPKIIGA L
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G13260.12e-81RAV family protein