PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIW02256

Organism

Lupinus angustifolius

Taxonomic ID

3871

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; genistoids sensu lato; core genistoids; Genisteae; Lupinus

Family

C2H2

Protein Properties

Length: 305aa MW: 34332 Da PI: 6.4076

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIW02256	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	15.6	4.8e-05	124	143	1	20
EEETTTTEEESSHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHi 20 ++C+ C+k+F+r n++ H+ OIW02256 124 FSCSVCNKMFNRFNNMQMHM 143 89*****************9 PP
2	zf-C2H2	13.8	0.00017	209	231	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C +Cgk+F + + ++H +++ OIW02256 209 FGCRKCGKPFAVRGDWRTHEKNC 231 56*****************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 305 aa Download sequence
MQTHSFYISS SNGSSSNNNA FFEADEVLDD EASISLSLGL PGQHNNPKPF SISNQSDTTL 60 HQHQNPTTSD DHSGITVALH IGLPSTAENT NPTITKPDHL ISNPIQGQYW IPSPAQILIG 120 PTQFSCSVCN KMFNRFNNMQ MHMWGHGSQY RKGPESLRGM KPASSMLRLP CYCCAEGCKN 180 NIDHPRARPL KDFRTLQTHY KRKHGTKPFG CRKCGKPFAV RGDWRTHEKN CGKLWFCICG 240 SDFKHKRSLK DHVRAFGDGH APHTVDSCSD QNMMADDDLL LGDDEDDEEF DEDEEDSNNE 300 NDFHF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G13290.1	1e-121	C2H2 family protein

Link Out ? help Back to Top
Ensembl	OIW02256